BO25524.complete Sequence
1470 bp assembled on 2010-06-28
GenBank Submission: KX795002
> BO25524.complete
GAAGTTATCAGTCGCATGATGAAGTTCAGTTGTGTCCGCGTGGCGATGAG
ATGCAGTGGAGCCCACTCCATCCTCGAGAGAAATATGCTCTGCAGGATAA
TAGGGCGCCACAAATGTAGCTGTTTGACCCTGGAGAACACGTTCAAGTGC
TACGACCTGGAGAATGGACCCACAATGGACGTGGAGCTGTCCAGGGAGGA
CGCCCTGACGATGTACACGCAGATGCTGGAACTGCGCCGGTTCGAGACGG
TGGCGGGCAACTACTATAAGGAGCGAAAAATCCGCGGCTTCTGCCATTTA
TATAACGGACAGGAGGCCGTCGCTGTTGGCATGAAGCAGCGTTTGAGGTC
CTGCGACTCGGTCATAACGGCATACCGTTGTCATGCCTGGACCTATTTAA
TGGGTGTTTCCCTTTACGAAATAATGGCGGAATTGTTCGGAGTTCGAACT
GGATGCAGCCGGGGCAAAGGTGGCTCTATGCACATGTACAGCGATAAGTT
TTATGGCGGCAATGGTATCGTTGGTGCCCAAGTTCCGCTCGGCGCGGGAA
TTGGCCTCGCGCACAGTTATCGCAAGGACAACGGCGTGTCGGTGGTCCTT
TATGGTGATGGTGCCGCCAATCAGGGCCAGATCTTTGAGTCCTTCAACAT
GGCCAAGCTGTGGTGCTTGCCCTGCATATTCGTTTGCGAGAACAATCACT
ACGGCATGGGCACCCACGTTAAGCGGGCCTCTGCCATGACGGAGTTCTAC
ATGCGTGGCCAATATATCCCTGGTCTTTGGGTCGATGGCAATCAGGTGCT
GGCCGTGCGTAGCGCCACCCAATTCGCCGTGGACCATGCCCTCAAGCACG
GACCCATTGTGCTCGAGATGAGCACCTATCGCTATGTGGGTCACTCCATG
TCCGATCCGGGTACATCGTATCGCTCGAGAGAAGAAGTCCAATCGACGAG
GGAGAAACGCGATCCGATTACAAGTTTCCGCAGTCAGATCATCGCCTTGT
GTCTCGCCGACGAGGAGGAGCTGAAGGCCCTGGATGATAAGACTAGGAAG
CAGGTGGATAGCATTTGCAAGAAAGCCACCACCGACAGGGAGGTAGAACT
TGATGAGCTGCACACCGATATCTATGCCAAGAATGTGGATGGTAAGATCC
GCGGCGTGTCCGGATTCCATTTAGAGCACATCAAGCTGGCGGAGGTGTGC
TTTGGCAAGCCGAAGAAGACGCCGGCCAGCGAGATCAACGACGTGCCAGT
GGGCGCAGAGATTGACGTGGCCAAGGCCAAGGAAAGGAAGGCCAAGCAGG
ATGCCAAGAAGGCCAAGGAAGCCAAGGAACCTAAAGGTGGCGACAAGAAG
GGCGCCGACGCCAAGCAGCCCAAAGGCGAGGGCGACGATGGCGATAAGAA
GCCAAAACCAGCCGCACAGCCGCCCACCAAGGCGCCACCCGCTCCCAAAA
AGGCAAGCTTTCTAGACCAT
BO25524.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:54:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7024-RA | 1440 | CG7024-PA | 1..1437 | 16..1452 | 7170 | 99.9 | Plus |
| l(1)G0334-RB | 987 | CG7010-PB | 371..702 | 593..924 | 265 | 72 | Plus |
| l(1)G0334-RD | 1200 | CG7010-PD | 584..915 | 593..924 | 265 | 72 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7024-RA | 1878 | CG7024-RA | 256..1692 | 16..1452 | 7170 | 99.9 | Plus |
| l(1)G0334-RB | 1992 | CG7010-RB | 1023..1354 | 593..924 | 265 | 72 | Plus |
| l(1)G0334-RD | 1667 | CG7010-RD | 698..1029 | 593..924 | 265 | 72 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:54:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4706005..4707318 | 139..1452 | 6555 | 99.9 | Plus |
| X | 23542271 | X | 4705564..4705686 | 16..138 | 615 | 100 | Plus |
| X | 23542271 | X | 4704287..4704415 | 796..924 | 195 | 76.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:54:02 has no hits.
BO25524.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:52 Download gff for
BO25524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 258..1692 | 18..1454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:09 Download gff for
BO25524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 258..1692 | 18..1454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:06 Download gff for
BO25524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 258..1692 | 18..1454 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:06 Download gff for
BO25524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4705566..4705686 | 18..138 | 100 | -> | Plus |
| X | 4706005..4707318 | 139..1454 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:09 Download gff for
BO25524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4599599..4599719 | 18..138 | 100 | -> | Plus |
| arm_X | 4600038..4601351 | 139..1454 | 99 | | Plus |
BO25524.pep Sequence
Translation from 15 to 1470
> BO25524.pep
MMKFSCVRVAMRCSGAHSILERNMLCRIIGRHKCSCLTLENTFKCYDLEN
GPTMDVELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQE
AVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRG
KGGSMHMYSDKFYGGNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGA
ANQGQIFESFNMAKLWCLPCIFVCENNHYGMGTHVKRASAMTEFYMRGQY
IPGLWVDGNQVLAVRSATQFAVDHALKHGPIVLEMSTYRYVGHSMSDPGT
SYRSREEVQSTREKRDPITSFRSQIIALCLADEEELKALDDKTRKQVDSI
CKKATTDREVELDELHTDIYAKNVDGKIRGVSGFHLEHIKLAEVCFGKPK
KTPASEINDVPVGAEIDVAKAKERKAKQDAKKAKEAKEPKGGDKKGADAK
QPKGEGDDGDKKPKPAAQPPTKAPPAPKKASFLDH
BO25524.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7024-PA | 479 | CG7024-PA | 1..479 | 1..479 | 2542 | 100 | Plus |
| l(1)G0334-PD | 399 | CG7010-PD | 45..392 | 43..390 | 1142 | 59.8 | Plus |
| l(1)G0334-PA | 399 | CG7010-PA | 45..392 | 43..390 | 1142 | 59.8 | Plus |
| l(1)G0334-PC | 443 | CG7010-PC | 89..436 | 43..390 | 1142 | 59.8 | Plus |
| l(1)G0334-PB | 328 | CG7010-PB | 1..321 | 70..390 | 1075 | 61.1 | Plus |
