Clone BO25526 Report

Search the DGRC for BO25526

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG17083-RA
Protein status:BO25526.pep: Imported from assembly
Sequenced Size:1684

Clone Sequence Records

BO25526.complete Sequence

1684 bp assembled on 2010-07-15

GenBank Submission: KX799636

> BO25526.complete
GAAGTTATCAGTCGACATGGAGGAAATCAAGAAGTTTGACAAGCTTGCCT
TCCTGGAAAGCTACCTGCTGAAGCACAAGGAATTGGGCAAGCGACAGCGC
GAGTACAAGAAGATCCTGTCCAGCAAACTCAAGACCCGCAAGGAGACCAT
CATCGAGGCCAGCTTTGAGACGGCCATCGATCAGCTGGAGGAGGAGAAAA
ACGATCTGCGTGCCCAGATCTGGGTGGCCAGTGGTACGACCCACAAAAAA
CAGAACAATCGCTGGCTGGAGCTGATTCGCTGCCATGTCGAGTGCCAGGA
GAATCTGTCGCAGGACATTAACTCTCTGAAGACATCGATTTCCAACATGG
AGAAGGAGATAAGTCGCATGTCCAAGCAAATATACAACCTGAATCGTTTA
ACCATTCCGGATCAGCAACATCAGGCCTATGTAATGCGAGCACGGAAAAG
GATGACCATTTTGGAGAATTCCCTGGAGGTGGGAGTGCGTCAGGAGTGCG
GTTTTACGGCAGCCAATGCGGATCTGCGAGAGCAGCTTATCCGCATCCTG
AATCATCGCACCTTCTTCAATGATTCATACACCAAAATGGTGCAGAAGCT
GAACAGCGAGAAAAAGTATCTCATAGATCTGATCGAATACGCTCTGAATA
CCTTCGATGGCTGCATTGAGGTGTACGAGAAAATTGATTTGTTGGCCAAA
AGGGAGGCCAAGGAGCGCGATATGAGACGTGTGGAGATGCAGGGTATTAT
GCGAAAGGTGGCAGCCGATGGTGATAACACCGCCTTCCTGAATTGCAAGT
CTAAGCCTCGAGAGCTGGCCGATTTGCAGCCCAAGGAGTACAAGCGAAGG
GATGAATTCCGACGGGTGCACAACAAAAAGATCAATCTCTACAACTCGGT
GCTGCAGAAGATTCTCCAGTATACGGAATCTAGCAATATGGACGAGGTGA
TCGATAAGTTTCAGCAGCAGGAGAGTCTCTATTACTCGTTCTTCAACTAT
GCCAACGAAATGAGCTACCACATAACTATGCTGAATAATTCGGTGAATCG
CCTGTTTGAGGATATAGTTAACCTGAAAAAGGATAACTCCAACACGCTGC
AGGACCAACTGGATCAGATTTCCAGTCTGGAGAACAAGGTGCGTAACAAA
CAGGAATCCAACATGGAACTGCACAAGGCGCGGGAAAACAACGATGCACG
TTTGGAGAATCTTCTACAGGGCGTGGAGACGGTCTGCGAGATGTGTTCCA
TAGATGCCAGTCCGCTGACCAAACTCCTTGGTGACCACACCCACGTCAAT
CTGGTTAATGTCAATCGATTCTTGAAGCTGCTCGAGACAAGGGTCCAGGA
GCTGACGGCTAGTGTTTATGTGATGGAGCGCCAAGAGGAGGGCCGCTTCG
ACTATGTGGTCAAGCAGATCGAGAAGATCTGCGAGCTGCCCACCGATCTC
AATGACATTGTGCTCACCCAGCAGTGTCCCGAGTGCGCCGAGGGTGAAGC
CTTCAACATGGATGAGGGCGGCGATGGTGTCCTTGTCCACACGGTCGCCG
AGGCCAAGAAGAAGCTGTACGAGAAGGTTACGCAGCCGGAGATGCAGTAC
CGCCTGCACAGCATCAGCCAGTGTCGTCTGCCGCGATCCCGTCTCCTGGC
CGCCAAGCGCAACATGGCAAGCTTTCTAGACCAT

BO25526.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17083-RA 1653 CG17083-PA 1..1650 17..1666 8250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17083-RA 1959 CG17083-RA 159..1809 16..1666 8255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23286243..23287893 1666..16 8255 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:55:42 has no hits.

BO25526.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:00:39 Download gff for BO25526.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 160..1809 17..1668 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:11 Download gff for BO25526.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 160..1809 17..1668 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:09 Download gff for BO25526.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 160..1809 17..1668 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:09 Download gff for BO25526.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23286241..23287892 17..1668 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:11 Download gff for BO25526.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19111963..19113614 17..1668 99   Minus

BO25526.pep Sequence

Translation from 16 to 1684

> BO25526.pep
MEEIKKFDKLAFLESYLLKHKELGKRQREYKKILSSKLKTRKETIIEASF
ETAIDQLEEEKNDLRAQIWVASGTTHKKQNNRWLELIRCHVECQENLSQD
INSLKTSISNMEKEISRMSKQIYNLNRLTIPDQQHQAYVMRARKRMTILE
NSLEVGVRQECGFTAANADLREQLIRILNHRTFFNDSYTKMVQKLNSEKK
YLIDLIEYALNTFDGCIEVYEKIDLLAKREAKERDMRRVEMQGIMRKVAA
DGDNTAFLNCKSKPRELADLQPKEYKRRDEFRRVHNKKINLYNSVLQKIL
QYTESSNMDEVIDKFQQQESLYYSFFNYANEMSYHITMLNNSVNRLFEDI
VNLKKDNSNTLQDQLDQISSLENKVRNKQESNMELHKARENNDARLENLL
QGVETVCEMCSIDASPLTKLLGDHTHVNLVNVNRFLKLLETRVQELTASV
YVMERQEEGRFDYVVKQIEKICELPTDLNDIVLTQQCPECAEGEAFNMDE
GGDGVLVHTVAEAKKKLYEKVTQPEMQYRLHSISQCRLPRSRLLAAKRNM
ASFLDH

BO25526.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:30:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG17083-PA 550 CG17083-PA 1..550 1..550 2814 100 Plus
CG14905-PA 473 CG14905-PA 1..452 1..458 441 24 Plus