BO25527.complete Sequence
1990 bp assembled on 2010-07-15
GenBank Submission: KX799030
> BO25527.complete
GAAGTTATCAGTCGACATGTTGTCCCACGCCTTCAACATGCATCCGCAGA
GGCGTGTGCCCGTCATCCATGAGCAGATCGCAAAGCAGTGCGCCCTGAAC
ATTGTGCGCGTGGCCTCCGCCATGCCGCAACCGCAGCCCCGCTGCCCATC
CGGTCATGTGGTCGTGCTCGTGGAGCTGCGCCGGACGGACGAGCAGACCG
TGCACCGCTACCAGGTGAATGTGCCGCCAACGGGCTGGACCAACGAAGAT
TTGGAGGAGGAGGAAAAGCGATTCCAGCAATTGGTGCTCCCCGGTACACT
GGACAGTATGGGCCTTAAGCTGCCTCTGCCAGAGCGTCCTCCGTGTCCAA
TGCATGGGCGTTCCATCATGGAGATGGGCTGGTCACCGAACTCCAACATG
GGTCCGCCTCCTATGCTGATGATTCAGTCTTCGGTACACATCACCAACGG
GCAGGATGGCGCCACTGACTTCGCCACCTTCAGAGAGCCCGTTGTGACTA
GTGAATCACCGGATAATTTGAGAGCGCACTTTATGGCCAGTCTATATCAG
CAGCAACCAAGTCCGCTGAGCTACTCGGACATCTGGGTATCAGATAGTCC
ATCGACGGGCTTGCCCAGAAGTGAAGCCCTCTCCACGACCCATTTTCCGC
AGTTTTATCTGGGCGAGAACGCCGAGTCTATGGTCGCTAATAAGATACGA
CCTATCAATGGTTATCCTATCAATGGTTATCCTATCAGTGGTTATCCGAC
AGTTCCGAGACCAGCTGTGAAAAAGCCTCGTCACGTCGCCGAACTTTGCT
TGGACAGCAATGGAGAGTATGTGCTCAACAAGCAGCTGCATCAACCGTTG
ATTAGCCGTCAACCCGATCCGATCATTCCCAGTGTCTCGAGCAGGGATCC
ACACTACTTCATACAAAATCAAAGCCACCAGTTGGAGTCCGCCATTAAAG
GACTCAATGGCTACACGAACGTCGCCCAAGAGTCTGAGAAGCCAAAAAAT
GGTTACAAATATCAGCCCGCGGCCTTTGCAGATCAACGGATTGTCCTGCA
ACCAAAGCTGGGACAGGGACAGGGACAGGCGCAGGGAGCAGTACCCGGAT
TTATACCCAATCACCTGCAGAGTCGTGTGGCCATGGTCGAGCCTCGCATA
CGCCAGGAATCACTCATAAAACCACAAAATCCAGATTTGGCGTTGCCGTC
GGAGGCACATCCACCGGTTCCCCAGGACCTGCAGTCGCTCTTCCGCTGGA
ACTACTGTGCATTGTGTAACATGGTCATTCGGTCGACACAGAGTGCCATT
GATCACTACTCGTCGCGTGCCCATGAGCGCAGGATTAGCTCGTGGCTGGT
GCGTAAGTGCTACGCCAACCTTACTGGACGGGATGCGGACGCCTTGGGCG
GGGCCATCAGCCAATCGGAATTCTACTGCAAGTTGTGCGACCTGAAGCTG
ACCTCGTTGTCGCACGCACAGCAACACTTCCTTGGGCGGCGTCACCGAAT
CGCGGCGCGCCACAGGATCAGACCATTCAGTGATGGCTTCTACGATCGGG
AGGGCAATTGGGTGCGCACGGACATCAAGTACCCCATGTGCGAGCTGTGC
GACGTGATCATCACCTCGGAGTCGCAAATGGCCATGCACCTGGCGGGTGC
ACGCCACCGTAGACGGGTCCAAATTGCCTATGCTGGTGAGTCCGCCGGGG
GCATGGAAATGGGCATTGGTCTGGTCCCGTTCGATGGCTCGCACATGTAC
CGGATACGCGGCAACGGATCGCTAGCCCCAATAAGGCCCTTGGGCTCACA
GCTCCTCCAAGGCTCCGCTTATCCGCTATCCCTGACCGATCCGAGTGCCG
TCTTCTACTGCGATGCCTGCAACATTACGCTCAACCATCTGAAGTCGGTG
AATCAGCATGAGCAGGGACGCATGCACCGCCGGAATATGCACAGGTTGCC
CGCCCAAGCGGTCTTCTTCGAGGCAAGCTTTCTAGACCAT
BO25527.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:55:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17098-RA | 1959 | CG17098-PA | 1..1956 | 17..1972 | 9780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:55:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17098-RA | 2737 | CG17098-RA | 500..2458 | 14..1972 | 9795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:55:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10652112..10653282 | 14..1184 | 5855 | 100 | Plus |
| 2L | 23513712 | 2L | 10653431..10654220 | 1183..1972 | 3950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:55:54 has no hits.
BO25527.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:00:41 Download gff for
BO25527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17098-RA | 143..2093 | 22..1974 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:13 Download gff for
BO25527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17098-RA | 508..2458 | 22..1974 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:12 Download gff for
BO25527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17098-RA | 508..2458 | 22..1974 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:12 Download gff for
BO25527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10652120..10653282 | 22..1184 | 100 | -> | Plus |
| 2L | 10653433..10654220 | 1185..1974 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:13 Download gff for
BO25527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10652120..10653282 | 22..1184 | 100 | -> | Plus |
| arm_2L | 10653433..10654220 | 1185..1974 | 99 | | Plus |
BO25527.pep Sequence
Translation from 16 to 1990
> BO25527.pep
MLSHAFNMHPQRRVPVIHEQIAKQCALNIVRVASAMPQPQPRCPSGHVVV
LVELRRTDEQTVHRYQVNVPPTGWTNEDLEEEEKRFQQLVLPGTLDSMGL
KLPLPERPPCPMHGRSIMEMGWSPNSNMGPPPMLMIQSSVHITNGQDGAT
DFATFREPVVTSESPDNLRAHFMASLYQQQPSPLSYSDIWVSDSPSTGLP
RSEALSTTHFPQFYLGENAESMVANKIRPINGYPINGYPISGYPTVPRPA
VKKPRHVAELCLDSNGEYVLNKQLHQPLISRQPDPIIPSVSSRDPHYFIQ
NQSHQLESAIKGLNGYTNVAQESEKPKNGYKYQPAAFADQRIVLQPKLGQ
GQGQAQGAVPGFIPNHLQSRVAMVEPRIRQESLIKPQNPDLALPSEAHPP
VPQDLQSLFRWNYCALCNMVIRSTQSAIDHYSSRAHERRISSWLVRKCYA
NLTGRDADALGGAISQSEFYCKLCDLKLTSLSHAQQHFLGRRHRIAARHR
IRPFSDGFYDREGNWVRTDIKYPMCELCDVIITSESQMAMHLAGARHRRR
VQIAYAGESAGGMEMGIGLVPFDGSHMYRIRGNGSLAPIRPLGSQLLQGS
AYPLSLTDPSAVFYCDACNITLNHLKSVNQHEQGRMHRRNMHRLPAQAVF
FEASFLDH
BO25527.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:30:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17098-PA | 652 | CG17098-PA | 1..652 | 1..652 | 3478 | 100 | Plus |
| CG1231-PA | 345 | CG1231-PA | 78..338 | 388..644 | 286 | 29.3 | Plus |
