BO25535.complete Sequence
1261 bp assembled on 2010-06-28
GenBank Submission: KX798194
> BO25535.complete
GAAGTTATCAGTCGACATGCCACAGTCAGAGGGCGGCTATGTATCGCTGC
CGGCCGTCAATGGCAATGGCGGCGCCATCTATCAGTCGACCACAGAGCCC
ACGGCCCCGCCCTCCGTTTTTGCGAGCGTGAAGCGGGCCATTGGCCAGGC
CATCAAGTCCTCGCCCACCGACAGCGAGGAGCTGCTCCGGTCGGACCGCC
TGCCGGTCATCGTCGGCGGCTCCAGCACCATGCCCGTTGATCCCATGGAT
GACATCGAACTGCGCTCCGTGCAGCTGCAATTCCCCAATGCCCGCGGCTC
CATCCTGGAGGCCTGCGAACAGCGACGCGTGCCCACAGACAAGGGCGATG
TCCACGTGGCCATACAGGGCGATACGGCCAAGCCGGCCATTATCACCTAC
CACGATTTGGGCCTCAACTACGCCACCAGCTTTGCTGGCTTCTTCAATTT
TCCAGTGATGCGAGGTTTGCTGGAGAACTTCTGTGTTTACCATGTGACTG
CTCCTGGCCAGGAGGAGGGTGCACCCACTTTGCCAGAGGATTACGTGTAT
CCGACCATGGATGATCTGGCCGCCCAGCTGCTTTTCGTGCTATCCCACTT
TGGCCTGAAGTCGGTGATTGGTTTCGGCGTTGGGGCCGGGGCGAATATTC
TGGCCCGTTTCGCTCACGCCCATCCGGACAAGGTGGGCGCCCTGTGCCTG
ATCAATTGCGTGTCCACGCAGTCGGGCTGGATCGAGTGGGGCTACCAGAG
CTTCAATGCCCGCTTCTTGCGCACCAAGGGCATGACACAGGGCGTGATCG
ATTATCTGATGTGGCACCACTTTGGACGCAATCCGGAGGAGCGCAATCAC
GACCTGGTGCAGATGTACAAGCAGCACTTCGAGCGTGGCGTTAATCCGAC
CAATCTTGCCATGCTGATCAACGCGTACATCCATCGCAACGACCTGCATC
TGGCGCGCACTCCGCCAGGAACTCCGGGCAGCGAAACGGCGGCCACCACG
CTGAAGATGCCGGTGATCAATATTACGGGTTCGCTCTCGCCGCACGTCGA
CGACACGGTGACCTTCAATGGCCGTCTAGATCCTACAAACTCATCGTGGA
TGAAGATTTCCGATTGCGCTTTGGTGCTGGAGGAGCAGCCGGCTAAGCTG
GCCGAGGCCTTCCGGCTCTTCTTGCAGGGCGAGGGCTACGTCAAGTACTT
CCGACCCGGCGACTGGGATGGCACTCAGTTGAGCAGCTTCATCGCAAGCT
TTCTAGACCAT
BO25535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:53:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESK2-RK | 1230 | CG15669-PK | 1..1227 | 17..1243 | 5970 | 99.1 | Plus |
| MESK2-RC | 1314 | CG15669-PC | 293..1311 | 225..1243 | 4930 | 98.9 | Plus |
| MESK2-RB | 1278 | CG15669-PB | 293..1259 | 225..1191 | 4670 | 98.9 | Plus |
| MESK2-RC | 1314 | CG15669-PC | 1..209 | 17..225 | 1045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:53:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESK2-RK | 2109 | CG15669-RK | 602..1829 | 16..1243 | 5975 | 99.1 | Plus |
| MESK2-RC | 2193 | CG15669-RC | 895..1913 | 225..1243 | 4930 | 98.9 | Plus |
| MESK2-RJ | 2702 | CG15669-RJ | 381..1348 | 223..1190 | 4675 | 98.9 | Plus |
| MESK2-RC | 2193 | CG15669-RC | 602..811 | 16..225 | 1050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21511404..21511968 | 541..1105 | 2690 | 98.4 | Plus |
| 2R | 25286936 | 2R | 21507513..21507722 | 16..225 | 1050 | 100 | Plus |
| 2R | 25286936 | 2R | 21510865..21511060 | 224..419 | 980 | 100 | Plus |
| 2R | 25286936 | 2R | 21511123..21511243 | 420..540 | 575 | 98.3 | Plus |
| 2R | 25286936 | 2R | 21512091..21512177 | 1104..1190 | 435 | 100 | Plus |
| 2R | 25286936 | 2R | 21512392..21512445 | 1190..1243 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:53:25 has no hits.
BO25535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:43 Download gff for
BO25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RK | 614..1840 | 17..1245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:54 Download gff for
BO25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RK | 603..1829 | 17..1245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:57 Download gff for
BO25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RK | 603..1829 | 17..1245 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:57 Download gff for
BO25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21512093..21512177 | 1106..1190 | 100 | -> | Plus |
| 2R | 21512393..21512445 | 1191..1245 | 96 | | Plus |
| 2R | 21507514..21507722 | 17..225 | 100 | -> | Plus |
| 2R | 21510867..21511060 | 226..419 | 100 | -> | Plus |
| 2R | 21511123..21511243 | 420..540 | 98 | -> | Plus |
| 2R | 21511404..21511968 | 541..1105 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:54 Download gff for
BO25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17399598..17399682 | 1106..1190 | 100 | -> | Plus |
| arm_2R | 17399898..17399950 | 1191..1245 | 96 | | Plus |
| arm_2R | 17395019..17395227 | 17..225 | 100 | -> | Plus |
| arm_2R | 17398372..17398565 | 226..419 | 100 | -> | Plus |
| arm_2R | 17398628..17398748 | 420..540 | 98 | -> | Plus |
| arm_2R | 17398909..17399473 | 541..1105 | 98 | -> | Plus |
BO25535.pep Sequence
Translation from 16 to 1261
> BO25535.pep
MPQSEGGYVSLPAVNGNGGAIYQSTTEPTAPPSVFASVKRAIGQAIKSSP
TDSEELLRSDRLPVIVGGSSTMPVDPMDDIELRSVQLQFPNARGSILEAC
EQRRVPTDKGDVHVAIQGDTAKPAIITYHDLGLNYATSFAGFFNFPVMRG
LLENFCVYHVTAPGQEEGAPTLPEDYVYPTMDDLAAQLLFVLSHFGLKSV
IGFGVGAGANILARFAHAHPDKVGALCLINCVSTQSGWIEWGYQSFNARF
LRTKGMTQGVIDYLMWHHFGRNPEERNHDLVQMYKQHFERGVNPTNLAML
INAYIHRNDLHLARTPPGTPGSETAATTLKMPVINITGSLSPHVDDTVTF
NGRLDPTNSSWMKISDCALVLEEQPAKLAEAFRLFLQGEGYVKYFRPGDW
DGTQLSSFIASFLDH
BO25535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESK2-PK | 409 | CG15669-PK | 1..409 | 1..409 | 2168 | 100 | Plus |
| MESK2-PC | 437 | CG15669-PC | 1..437 | 1..409 | 2125 | 93.4 | Plus |
| MESK2-PB | 425 | CG15669-PB | 1..420 | 1..392 | 2028 | 93.1 | Plus |
| MESK2-PE | 447 | CG15669-PE | 1..419 | 1..391 | 2024 | 93.1 | Plus |
| MESK2-PF | 447 | CG15669-PF | 1..419 | 1..391 | 2024 | 93.1 | Plus |
