BO25543.complete Sequence
256 bp assembled on 2010-06-28
GenBank Submission: KX794035
> BO25543.complete
GAAGTTATCAGTCGACATGTGTTGCGGACCCCTTGGATTCTGCGGACCCT
GTAGCCCGTGCGGCGGTCCTTGCGGACCTTGCGGACCCTGTGGTCCTTGC
GGTTCCTGCTGTAGTCCTTGTGGATCTTGCTGTGCGCCTTGCGGCCCTTG
CGGTCCTTGCGGTCCTTGCTGCGGGGGCTGTGGTCCATGCGGGCCTTGTG
GACCTTGCTGTGGACCTTGTAGGCCATATTGCGGGTGCGCAAGCTTTCTA
GACCAT
BO25543.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst84Db-RA | 225 | CG17934-PA | 1..222 | 17..238 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst84Db-RA | 415 | CG17934-RA | 69..291 | 16..238 | 1115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7365284..7365506 | 238..16 | 1115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:53:03 has no hits.
BO25543.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:38 Download gff for
BO25543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst84Db-RA | 70..291 | 17..240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:45 Download gff for
BO25543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst84Db-RA | 70..291 | 17..240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:50 Download gff for
BO25543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst84Db-RA | 70..291 | 17..240 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:50 Download gff for
BO25543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7365281..7365505 | 17..240 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:45 Download gff for
BO25543.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3191003..3191227 | 17..240 | 99 | | Minus |
BO25543.pep Sequence
Translation from 16 to 256
> BO25543.pep
MCCGPLGFCGPCSPCGGPCGPCGPCGPCGSCCSPCGSCCAPCGPCGPCGP
CCGGCGPCGPCGPCCGPCRPYCGCASFLDH
BO25543.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst84Db-PA | 74 | CG17934-PA | 1..74 | 1..74 | 529 | 100 | Plus |
| Mst98Cb-PA | 265 | CG18396-PA | 202..265 | 7..68 | 274 | 64.8 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 3..58 | 9..66 | 265 | 71.7 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 157..275 | 2..70 | 245 | 45.4 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 204..323 | 3..73 | 237 | 43.8 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 3..58 | 12..73 | 235 | 67.2 | Plus |
| Mst84Da-PA | 63 | CG17946-PA | 15..63 | 14..65 | 231 | 67.3 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 247..334 | 3..68 | 229 | 50.6 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 9..70 | 2..65 | 224 | 61.2 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 158..222 | 22..73 | 170 | 47.1 | Plus |
| Mst98Cb-PA | 265 | CG18396-PA | 158..221 | 22..73 | 160 | 47.1 | Plus |
