BO25544.complete Sequence
1120 bp assembled on 2010-06-28
GenBank Submission: KX799245
> BO25544.complete
GAAGTTATCAGTCGACATGATTGCCAAGCTAAAGCAGGAATATGCGGAGC
GCTGGCATTATCCTCCAATTGTGCCGCCAGCCAAGCTTCGATATGTTGCA
TGTGGAAAGGTAGCATTCTACGGCCACAACGATAAGCCGAAATACAAGCC
CTGCTGGCAGCATCCGCTCAATGTGCAGGATCAAACCCGCTTTGGAGTTT
GCTGGGAGTATCCGCCGGAGCGGTACAAGCGTCGTCCGCTTCCGCCACCG
TGCCGGGGATCGACCATTCCCATCCATTTGCTGAAGCCAACCTTCAAGCA
TTGTGAGAATATCTACTCCCGCTACGATTTTAAGCTTGAGCAGTGTGTGC
ACGAGCAAACTCTAGTAGTTGACCAGAAAATGAAGGCCCTGAAGAATGAG
CTGGAGCAGGCCAAACCATTTCAGATTGAGAGGGTTAAGGAGATGCGTTA
TCATGGAGTGCGTTATCGCATTTTAGCCAGCTCGACCGGATGCACTAAGA
CCTATCCCGAGTACATAAGCCGGATGACCGAAGAGCGGGCCCTTTGCGAG
TTTCAGAGAGCCTACAATATCGTCAATCAGTCAAACACCGATTTGAGCAA
TTTATACCTGGACATGAGTGAGTCAAAAAAGGAGCTAGATCAACGCGTAG
CCAGGTTGGACCGGTCTTTAGGAAGTACATTCTTGAAAGAGCTAGATTCG
GTGCTGCAAATAATCGAGGACTTAAACACGTATTTTTTTGGCGTGATCGT
GAAGCTAAAGACGTGGGCGGAGCTGATGGACCCTATGAAAGAGCACTCTA
TAGAGGACTATCTGGGGCTATTGAGTCAGGAAACAGACTTCCGGACTTTC
ATGAGTGCCGGCATGGAAAACTGCACCTGCAAGCGTTGCGACAAGAAGGA
TCCCTTGAAGCCGTACCTTCCGTGCTGGTGTCAAATGGAATCTAGCGAGG
ATGTTACAAATCTTAAGAATTTTGACGACGATTGTCCAAAGAACATAGCT
GGCATCACGCAACACGAAAGTGACATTGTGACACCTAGTGACACCTCCTT
GTTAGTGAGGGCAGCGGATGAAAAGGCAAGGCTTGCGATGAATCAGGCGG
AAGCAAGCTTTCTAGACCAT
BO25544.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:52:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13843-RA | 1089 | CG13843-PA | 1..1086 | 17..1102 | 5295 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:52:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13843-RA | 1183 | CG13843-RA | 54..1139 | 17..1102 | 5295 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22609538..22610106 | 17..585 | 2830 | 99.8 | Plus |
3R | 32079331 | 3R | 22610155..22610671 | 586..1102 | 2465 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:52:57 has no hits.
BO25544.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:37 Download gff for
BO25544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13843-RA | 54..1139 | 17..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:42 Download gff for
BO25544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13843-RA | 54..1139 | 17..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:48 Download gff for
BO25544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13843-RA | 54..1139 | 17..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:48 Download gff for
BO25544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22609538..22610106 | 17..585 | 99 | -> | Plus |
3R | 22610155..22610671 | 586..1104 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:42 Download gff for
BO25544.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18435260..18435828 | 17..585 | 99 | -> | Plus |
arm_3R | 18435877..18436393 | 586..1104 | 98 | | Plus |
BO25544.pep Sequence
Translation from 16 to 1120
> BO25544.pep
MIAKLKQEYAERWHYPPIVPPAKLRYVACGKVAFYGHNDKPKYKPCWQHP
LNVQDQTRFGVCWEYPPERYKRRPLPPPCRGSTIPIHLLKPTFKHCENIY
SRYDFKLEQCVHEQTLVVDQKMKALKNELEQAKPFQIERVKEMRYHGVRY
RILASSTGCTKTYPEYISRMTEERALCEFQRAYNIVNQSNTDLSNLYLDM
SESKKELDQRVARLDRSLGSTFLKELDSVLQIIEDLNTYFFGVIVKLKTW
AELMDPMKEHSIEDYLGLLSQETDFRTFMSAGMENCTCKRCDKKDPLKPY
LPCWCQMESSEDVTNLKNFDDDCPKNIAGITQHESDIVTPSDTSLLVRAA
DEKARLAMNQAEASFLDH
BO25544.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13843-PA | 362 | CG13843-PA | 1..362 | 1..362 | 1958 | 100 | Plus |