BO25547.complete Sequence
781 bp assembled on 2010-06-28
GenBank Submission: KX798137
> BO25547.complete
GAAGTTATCAGTCGACATGGTGGTTACTCGCAGTGCAGCTACGAAGAAGC
AGAACCAAGTGCTGACCTTATCTGACCAGAACATCCTAGCAGAATCTTCG
AGGACCAAAGGACCTCCTGTGCCCAAGAAGAATGTTAAGAAATTGCCGAC
TGCACGTCAGTGTGTCAAGGTGGCTGCAAATCTTCTAGACGCACAAGAAC
CTAACGAAAATGAAAACACAGGAACCCAAAGGAAGGATGGAAAGCAACTG
GATTCCAAATTGAGTTCCACAGTCCAAAATACAGAAGCAGCGAGGTCCAA
AGAAACTCCTGCACCCAAGAAGAATGTTAAGAAACTGCAGGCTGCACTTC
CGTGCGCCGACGCGGCTGCAAATCTTTTGGAGGAACAAGCATCTAATGAA
ATGAATGAAGAAGGACCTCCTGTGCCCAAGAAAAATGTGAAGAAACTTCC
GGCTGCACGTCAGTGTGTCAAGGTGGCTGCAAATCTTCTAGACGCACAAG
AATCTATCGAAAATGAAAAAACAGGAACAAAAAGGAAGGATGGGAAGCAA
CTGCAGGCACAAAATTCGAATGAAAATGAAAAAACAAGCACATTAAAGAA
GGATAAAAAACTACTGGCTTCCAAAACTCCAGAAGCAGCGACAAACGATA
ATGCAAATCCAAATATGAAACCAAGCCTAAAGAAGTCGACAAGGGAGCAC
AAGTCCAAAAAGTGTAATGACATTCAAAAAGCTGGAAAAGATCACATCGA
ACATCAAGCCGAAGCAAGCTTTCTAGACCAT
BO25547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31406-RB | 750 | CG31406-PB | 1..747 | 17..763 | 3735 | 100 | Plus |
| CG31406-RA | 447 | CG31406-PA | 92..444 | 411..763 | 1660 | 98 | Plus |
| CG31406-RA | 447 | CG31406-PA | 1..234 | 17..250 | 1110 | 98.3 | Plus |
| CG31406-RB | 750 | CG31406-PB | 92..234 | 411..553 | 550 | 92.3 | Plus |
| CG31406-RB | 750 | CG31406-PB | 395..537 | 108..250 | 550 | 92.3 | Plus |
| CG31406-RB | 750 | CG31406-PB | 83..193 | 291..401 | 225 | 80.2 | Plus |
| CG31406-RB | 750 | CG31406-PB | 275..385 | 99..209 | 225 | 80.2 | Plus |
| CG31406-RA | 447 | CG31406-PA | 83..193 | 291..401 | 225 | 80.2 | Plus |
| CG31406-RB | 750 | CG31406-PB | 290..379 | 417..506 | 180 | 80 | Plus |
| CG31406-RB | 750 | CG31406-PB | 401..490 | 306..395 | 180 | 80 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:53:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31406-RB | 1010 | CG31406-RB | 160..906 | 17..763 | 3735 | 100 | Plus |
| CG31406-RA | 636 | CG31406-RA | 180..532 | 411..763 | 1660 | 98 | Plus |
| CG31406-RA | 636 | CG31406-RA | 89..322 | 17..250 | 1110 | 98.3 | Plus |
| CG31406-RB | 1010 | CG31406-RB | 251..393 | 411..553 | 550 | 92.3 | Plus |
| CG31406-RB | 1010 | CG31406-RB | 554..696 | 108..250 | 550 | 92.3 | Plus |
| CG31406-RB | 1010 | CG31406-RB | 434..544 | 99..209 | 225 | 80.2 | Plus |
| CG31406-RB | 1010 | CG31406-RB | 242..352 | 291..401 | 225 | 80.2 | Plus |
| CG31406-RA | 636 | CG31406-RA | 171..281 | 291..401 | 225 | 80.2 | Plus |
| CG31406-RB | 1010 | CG31406-RB | 449..538 | 417..506 | 180 | 80 | Plus |
| CG31406-RB | 1010 | CG31406-RB | 560..649 | 306..395 | 180 | 80 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10349180..10349482 | 215..517 | 1515 | 100 | Plus |
| 3R | 32079331 | 3R | 10348920..10349117 | 17..214 | 990 | 100 | Plus |
| 3R | 32079331 | 3R | 10349796..10349906 | 653..763 | 555 | 100 | Plus |
| 3R | 32079331 | 3R | 10349011..10349117 | 411..517 | 430 | 93.5 | Plus |
| 3R | 32079331 | 3R | 10349376..10349482 | 108..214 | 430 | 93.5 | Plus |
| 3R | 32079331 | 3R | 10349668..10349744 | 581..657 | 370 | 98.7 | Plus |
| 3R | 32079331 | 3R | 10349545..10349607 | 518..580 | 315 | 100 | Plus |
| 3R | 32079331 | 3R | 10349002..10349112 | 291..401 | 225 | 80.2 | Plus |
| 3R | 32079331 | 3R | 10349256..10349366 | 99..209 | 225 | 80.2 | Plus |
| 3R | 32079331 | 3R | 10349271..10349360 | 417..506 | 180 | 80 | Plus |
| 3R | 32079331 | 3R | 10349382..10349471 | 306..395 | 180 | 80 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:53:15 has no hits.
BO25547.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:41 Download gff for
BO25547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31406-RB | 89..835 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:50 Download gff for
BO25547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31406-RB | 160..906 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:53 Download gff for
BO25547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31406-RB | 160..906 | 17..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:53 Download gff for
BO25547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10348920..10349117 | 17..214 | 100 | -> | Plus |
| 3R | 10349180..10349482 | 215..517 | 100 | -> | Plus |
| 3R | 10349545..10349607 | 518..580 | 100 | -> | Plus |
| 3R | 10349668..10349739 | 581..652 | 100 | -> | Plus |
| 3R | 10349796..10349906 | 653..765 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:50 Download gff for
BO25547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6174642..6174839 | 17..214 | 100 | -> | Plus |
| arm_3R | 6174902..6175204 | 215..517 | 100 | -> | Plus |
| arm_3R | 6175267..6175329 | 518..580 | 100 | -> | Plus |
| arm_3R | 6175390..6175461 | 581..652 | 100 | -> | Plus |
| arm_3R | 6175518..6175628 | 653..765 | 98 | | Plus |
BO25547.pep Sequence
Translation from 16 to 781
> BO25547.pep
MVVTRSAATKKQNQVLTLSDQNILAESSRTKGPPVPKKNVKKLPTARQCV
KVAANLLDAQEPNENENTGTQRKDGKQLDSKLSSTVQNTEAARSKETPAP
KKNVKKLQAALPCADAAANLLEEQASNEMNEEGPPVPKKNVKKLPAARQC
VKVAANLLDAQESIENEKTGTKRKDGKQLQAQNSNENEKTSTLKKDKKLL
ASKTPEAATNDNANPNMKPSLKKSTREHKSKKCNDIQKAGKDHIEHQAEA
SFLDH
BO25547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31406-PB | 249 | CG31406-PB | 1..249 | 1..249 | 1259 | 100 | Plus |
| CG31406-PA | 148 | CG31406-PA | 10..148 | 105..249 | 591 | 83.4 | Plus |
| CG31406-PA | 148 | CG31406-PA | 1..109 | 1..119 | 394 | 72.3 | Plus |
