Clone BO25549 Report

Search the DGRC for BO25549

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG32161-RA
Protein status:BO25549.pep: Imported from assembly
Sequenced Size:718

Clone Sequence Records

BO25549.complete Sequence

718 bp assembled on 2010-06-28

GenBank Submission: KX794661

> BO25549.complete
GAAGTTATCAGTCGACATGATGACCTGCTTCCTCAGTCGCTTTCTGGGCC
TGGGCAGGTGCGGTCTGCAGGTGCTCGAAAGGCGGATGGGCCATTTCAAC
CATTGCACCTTGGCCCTGGCCACTCTCGACCTTGTCTGCATTGTTTGCCT
GCTCCATTACCAACTGGCGCGGCATGGCCGAGATCTGTTTTTTTGGTGCG
AGGAACTGGACCAACGACTAGTGGAGTACATGCTATCTGCAGTCGTATTG
ATGGCCAGCGTTAGTGTGCTGGGCTCGTGCGTGGATGGCTTTATCTTCTC
TGCCTTGGTTCAGCGGAAAATGAGTCGGTTTGATATGCCGCGACAGTATT
TTGAAGATCGTTACCGCAGATTCGTCTTCATGCGGCTGGTCAGGCAACTA
GAGCAGGCTCTCAAAGTGCAGGCTAAGCAGTCTGAGTTGGGCGAAAGAAT
GATGACGCCACTCGCCAATCTGTTCGAGGCGCAGCAGCTGATCAAGGAGG
CAATCGATGAGTTTCGCACAGCGGTGCGAGTCCTACTGTGGCCCAATCGA
TCCGATGTGCTGGCAGAGGCGTTTGTCCTCTTCCACATTAGCGAATCGCA
GTTGTCGGATCTGACACTTCAAGGCTACAGGCTGAACGACGTCGAGGGGG
AAGACATGTCCAATTCCCGTCTTAGTCAAATGCTTAACCCACTTTGGTAT
GCAAGCTTTCTAGACCAT

BO25549.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:52:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG32161-RA 687 CG32161-PA 1..684 17..700 3390 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32161-RA 774 CG32161-RA 71..754 17..700 3390 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:52:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16846297..16846980 17..700 3390 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 08:52:41 has no hits.

BO25549.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:33 Download gff for BO25549.complete
Subject Subject Range Query Range Percent Splice Strand
CG32161-RA 71..754 17..702 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:34 Download gff for BO25549.complete
Subject Subject Range Query Range Percent Splice Strand
CG32161-RA 71..754 17..702 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:42 Download gff for BO25549.complete
Subject Subject Range Query Range Percent Splice Strand
CG32161-RA 71..754 17..702 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:42 Download gff for BO25549.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16846297..16846980 17..702 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:34 Download gff for BO25549.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16839397..16840080 17..702 99   Plus

BO25549.pep Sequence

Translation from 16 to 718

> BO25549.pep
MMTCFLSRFLGLGRCGLQVLERRMGHFNHCTLALATLDLVCIVCLLHYQL
ARHGRDLFFWCEELDQRLVEYMLSAVVLMASVSVLGSCVDGFIFSALVQR
KMSRFDMPRQYFEDRYRRFVFMRLVRQLEQALKVQAKQSELGERMMTPLA
NLFEAQQLIKEAIDEFRTAVRVLLWPNRSDVLAEAFVLFHISESQLSDLT
LQGYRLNDVEGEDMSNSRLSQMLNPLWYASFLDH

BO25549.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32161-PA 228 CG32161-PA 1..228 1..228 1174 100 Plus