BO25554.complete Sequence
490 bp assembled on 2010-06-28
GenBank Submission: KX796585
> BO25554.complete
GAAGTTATCAGTCGACATGTTCTCGAGATTAGCCTTACGTCCTTTGACTG
TGGCCACATCTCGTTCGGCTACCACCCATTCCGCCCAAGGACTAAGTAGG
CTCCCTGGGCATGGAAGTCCCGGAAAGGTTCGCCCGGGTTTCCCGTCCGA
CAATTGGGTTAAAGGACCCATGGGCGTCGGCCTGTTGGCATATATCTGTT
CCGGAGACTGTTGCGCCATTAAGCACGAGCACAGCGGCCTATCCTTGGGC
ATCATGGAAGATGGCTACTACAGCAGTGGAATCACCATCGGTATCCTGAC
CACATTTGCTGTGATTAGGCTTCTTCCAGCGATTGTAAAGTGGGCTGATA
GCGAGATTATTAAAATTGAGTCCGAGTACGAAAAGAGTCGTGAAACTAAG
ATCAAGGTCCTATCAATCTCGCCCTCGAACGGAAATAAGGATCCTAGCAA
GGATAATGCCGATCAAAACGTGGCAAGCTTTCTAGACCAT
BO25554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-RA | 459 | CG17300-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:52:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-RA | 699 | CG17300-RA | 124..579 | 17..472 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13086744..13087075 | 361..30 | 1660 | 100 | Minus |
| 3L | 28110227 | 3L | 13086507..13086617 | 472..362 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:52:17 has no hits.
BO25554.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:28 Download gff for
BO25554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 129..579 | 22..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:25 Download gff for
BO25554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 129..579 | 22..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:35 Download gff for
BO25554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 129..579 | 22..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:35 Download gff for
BO25554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13086505..13086617 | 362..474 | 98 | <- | Minus |
| 3L | 13086744..13087081 | 22..361 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:25 Download gff for
BO25554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13079605..13079717 | 362..474 | 98 | <- | Minus |
| arm_3L | 13079844..13080181 | 22..361 | 98 | | Minus |
BO25554.pep Sequence
Translation from 16 to 490
> BO25554.pep
MFSRLALRPLTVATSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNWVKG
PMGVGLLAYICSGDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVI
RLLPAIVKWADSEIIKIESEYEKSRETKIKVLSISPSNGNKDPSKDNADQ
NVASFLDH
BO25554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:16:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-PA | 152 | CG17300-PA | 1..152 | 1..152 | 789 | 100 | Plus |
| ATPsyn-b-PA | 243 | CG8189-PA | 1..137 | 1..133 | 245 | 43.3 | Plus |
