BO25555.complete Sequence
1108 bp assembled on 2010-06-28
GenBank Submission: KX795039
> BO25555.complete
GAAGTTATCAGTCGACATGGCTGCGGCCACCAACAACGATTCCTCCGGCG
TGGAGTCGGCCAAGGAGGAGGTGGAGATGTCGATGCCGCCATCGCCCATG
TCGATGGCCATGGTACTGGCCAAATCGACACCGATGCCCATGCCCACCAG
CGCCTCCAAGGGGATCATGATAACGCCGCCGCCACCGGCAATGCCGCCCA
CGCCCACATCGTCGCCCAACACGCACGGCGAGTGGCCCCACATGAACATC
AACCTCAACCTGAACATGAGTTCAAACCCCAGCACGAATGCATCATTCCA
GCTGAGCAGAGATCGGGGCGAGCACTTTGCCCTGCCGCATCTGCCGCCCC
TGCCGCTGAATCCAAATGCCTCCAATGCCGAGTATCTGCCCAGCCTGATT
CATCCAAGCACCCTGCCCTCGGGTAGCAAAAGCTTCAAGATGCGGCCGCG
AATGCAGCGTCTAAAGCACTCCTACAGCTACAGCAACATAATCGTCCAGT
CAAATGGCCGCAAACTGCGCACCGCCGCCTCCACCTGCAACATCGAGCTG
CTCAACCGCATCCTTGAGGGTGGGGCCAATCCAAATGCCGCCGACGAGTA
CAATCGTAGTCCCCTGCATCTGGCCGCCTGTCGTGGCTACATACCCATTG
TCCAGCAGCTACTAAAGTACGGAGCGAACCCAAATGTAGTCGACTCGCTG
GGGAATACCCCACTCCATCTGGCTGTGATTTCGGCCAGCTCCAATAACTT
CAACGTTGTGGTGGGTGTGCTGCTCCAGGGCGGCGCCAGTGTCCACATGT
ACGATCGCAGCAACAAGTCACCGCTGGAGCTCGCCGAGGCCAAGCTAAGA
TTGCTGCGCAATCGTTACGATCACCCTACGCCGGAGACGGCCAAAATCCT
CGAGGACATGTGCATGCTGACCACGCTCATCTTACGCTACATGGTAAAGC
AGCAGCGCGAGCTGGAGGATCTCTCCGCGCTGGAGAAGCGACTGCAGAAC
CTGAGCACCAGCGATGACCAAGAGCAGGTCGTATCCCAGACCGCCGATGA
GCTGCTCGCCAGTGTCGAGCGGCTATCAATCAACAACAAGGCAAGCTTTC
TAGACCAT
BO25555.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:52:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-RB | 1077 | CG10809-PB | 1..1074 | 17..1090 | 5370 | 100 | Plus |
| CG10809-RA | 1077 | CG10809-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:52:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-RB | 2233 | CG10809-RB | 401..1474 | 17..1090 | 5370 | 100 | Plus |
| CG10809-RA | 1966 | CG10809-RA | 339..1412 | 17..1090 | 5370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:52:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9858416..9859489 | 1090..17 | 5370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:52:12 has no hits.
BO25555.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:27 Download gff for
BO25555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 291..1364 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:22 Download gff for
BO25555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 339..1412 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:33 Download gff for
BO25555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 339..1412 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:33 Download gff for
BO25555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9858414..9859489 | 17..1092 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:22 Download gff for
BO25555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9851514..9852589 | 17..1092 | 99 | | Minus |
BO25555.pep Sequence
Translation from 16 to 1108
> BO25555.pep
MAAATNNDSSGVESAKEEVEMSMPPSPMSMAMVLAKSTPMPMPTSASKGI
MITPPPPAMPPTPTSSPNTHGEWPHMNINLNLNMSSNPSTNASFQLSRDR
GEHFALPHLPPLPLNPNASNAEYLPSLIHPSTLPSGSKSFKMRPRMQRLK
HSYSYSNIIVQSNGRKLRTAASTCNIELLNRILEGGANPNAADEYNRSPL
HLAACRGYIPIVQQLLKYGANPNVVDSLGNTPLHLAVISASSNNFNVVVG
VLLQGGASVHMYDRSNKSPLELAEAKLRLLRNRYDHPTPETAKILEDMCM
LTTLILRYMVKQQRELEDLSALEKRLQNLSTSDDQEQVVSQTADELLASV
ERLSINNKASFLDH
BO25555.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:16:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-PB | 358 | CG10809-PB | 1..358 | 1..358 | 1838 | 100 | Plus |
| CG10809-PA | 358 | CG10809-PA | 1..358 | 1..358 | 1838 | 100 | Plus |
| Ank-PE | 1549 | CG1651-PE | 493..603 | 159..273 | 162 | 38.3 | Plus |
| Ank-PD | 1549 | CG1651-PD | 493..603 | 159..273 | 162 | 38.3 | Plus |
| Ank-PC | 1549 | CG1651-PC | 493..603 | 159..273 | 162 | 38.3 | Plus |
