BO25556.complete Sequence
1156 bp assembled on 2010-06-28
GenBank Submission: KX795975
> BO25556.complete
GAAGTTATCAGTCGACATGGATGTCGAAACAAGTCTGGATATCGAAGAAA
TGCGCCGAAGGATTCAGCAAGGCATCAACAGATGCTGTGAACAACTGCTT
GAAATAGCCATGATTTTAACCCATAAAGGTGGTCAGGTTTTAAACCGTTT
GAAGGGAGCATCATTCCCGGAGCTCGCCCAAAATAGTGAAAATATCGGTA
ATGGTTCAATGTCCGAAAATCAGAATCAAAGGCTCGATCCCATGACAAGT
GCACAATATACTACTTTAGGATTTGGAAACTTTGATGGCGAGGGGGACTA
CTTGCGGCAGAAGAATAAAATCAACATTCAACTTCCGCGTCTTGTGAGCG
TGACTTGCGGCTTTGCCAAGGATCACATAAGATATCCGGAATATAATCGT
GGAAAGTTTGGTGAGGATGCCTGGTTCATGTCCTCCAGTCCACAGGCGTG
CATAATGGGCGTGGCCGATGGAGTGGGCGGTTGGCGAAATTATGGCGTTG
ATCCCGGAAAATTCAGTATGACCCTAATGCGATCCTGTGAACGAATGTCA
CATGCACCCGATTTTAAGCCGAACAGACCGGAAATACTACTGGAACGAGC
CTATTTTGATCTCCTAGACCAAAAGTGTCCCATTGTTGGCAGCTGTACGG
CGTGTATTTTAGCTCTTAAACGAGATGATAGCACCTTATATGCAGCAAAT
ATCGGAGACAGTGGTTTTTTGGTGGTGCGATCTGGTAAAGTGGTTTGCCG
GTCCCAGGAGCAGCAGCATCAATTTAACACGCCCTATCAATTGGCATCGC
CGCCTCCGGGTTATGACTTCGATGCAGTATCGGATGGGCCCGAATCAGCG
GATACCATTCAATTCCCGATGCAACTGGGCGACGTCATTCTGCTGGCCAC
CGATGGGGTCTACGATAATGTACCTGAAAGCTTTCTCGTGGAGGTCCTTA
CGGAAATGTCTGGCATATCGAATCCCGTACGGCTTCAAATGGCCGCCAAT
ACGGTGGCTTTAATGGCCCGCACGTTGAGCTTCAGTCCGAAACACGATTC
TCCATTTAGTCAGAATGCCCGGAAACACGACATCGATGCATGGGGTGGAA
AACCGGATGACATTACGGTCCTATTGGCCAGTGTCGTCGCAAGCTTTCTA
GACCAT
BO25556.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15035-RA | 1125 | CG15035-PA | 1..1122 | 17..1138 | 5610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:52:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15035-RA | 1477 | CG15035-RA | 76..1197 | 17..1138 | 5610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:52:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7401978..7403099 | 1138..17 | 5610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:52:06 has no hits.
BO25556.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:26 Download gff for
BO25556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15035-RA | 76..1197 | 17..1140 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:21 Download gff for
BO25556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15035-RA | 76..1197 | 17..1140 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:30 Download gff for
BO25556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15035-RA | 76..1197 | 17..1140 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:30 Download gff for
BO25556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7401976..7403099 | 17..1140 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:21 Download gff for
BO25556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7296009..7297132 | 17..1140 | 99 | | Minus |
BO25556.pep Sequence
Translation from 16 to 1156
> BO25556.pep
MDVETSLDIEEMRRRIQQGINRCCEQLLEIAMILTHKGGQVLNRLKGASF
PELAQNSENIGNGSMSENQNQRLDPMTSAQYTTLGFGNFDGEGDYLRQKN
KINIQLPRLVSVTCGFAKDHIRYPEYNRGKFGEDAWFMSSSPQACIMGVA
DGVGGWRNYGVDPGKFSMTLMRSCERMSHAPDFKPNRPEILLERAYFDLL
DQKCPIVGSCTACILALKRDDSTLYAANIGDSGFLVVRSGKVVCRSQEQQ
HQFNTPYQLASPPPGYDFDAVSDGPESADTIQFPMQLGDVILLATDGVYD
NVPESFLVEVLTEMSGISNPVRLQMAANTVALMARTLSFSPKHDSPFSQN
ARKHDIDAWGGKPDDITVLLASVVASFLDH
BO25556.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:15:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15035-PA | 374 | CG15035-PA | 1..374 | 1..374 | 1968 | 100 | Plus |
| CG12091-PB | 321 | CG12091-PB | 54..319 | 107..373 | 860 | 59.9 | Plus |
| CG12091-PA | 321 | CG12091-PA | 54..319 | 107..373 | 860 | 59.9 | Plus |
| fig-PA | 314 | CG7615-PA | 43..309 | 107..373 | 583 | 46.5 | Plus |
