BO25557.complete Sequence
2173 bp assembled on 2010-07-15
GenBank Submission: KX795891
> BO25557.complete
GAAGTTATCAGTCGACATGGCCAAGATCATTCAAATGGCGGTGATGCTGG
GCAGCTCCAAGCTGGGCCACGGCGCCTTTGGATTCGATGAAAGGCAAGCG
GACTCGACTCCAGTGCCACAGATGAAACGGGAGCTGCCCACGCGAAAGAT
GTGCCTGGAGGCCTTTAAGCGAACCCACTACGACATCCTCATCATTGGCG
GCGGCGCCGTGGGTTCCGGCTGTGCTCTCGATGCTGCCACGCGGGGCTTG
AAGACCGCCCTGGTGGAAGCGAATGACTTTGGCAGCGGCACTTCCTCCAA
ATCGAGCAAACTGTTGCACGGCGGCCTCAGGGATCTGGAGCAGGCCATCT
CGCGTCTGGACGTGGCTGCCTTTCGGCGTGTTCGCTGCTCCTTGCAGGAA
CGCAGCCACATTGGCAAGCTGGCGCCGCATCTTAGCCAGCCGGTCCCCAT
CCTGCTGCCCGTCCACCACTGGTGGCAGGCTCCGCTCTACTACATGAAGC
TAAAGATTTACCACCTGATGGCGCCCAAGGCCACCAGGAGTTTTCAGTAT
CTGAGTGCCGACGACGCGTTGGAAGTATTTCCGATGCTGCGACGCCAGGA
GCTGTTTGGCGCCTTCGTCTTCTACGAGGGTCAGCACGACGATGCCAGGA
TGTGCCTTTCGGTTGCCCTTACAGCGGCTCGTTACGGAGCAGATATCTGC
AACCACATGAAGGTCTCGAGACTCATCAAGAACAAGGATGGCAATGTGGC
GGGCGCGGAGGCGGTGGACCAGCTGACGGGCAAGAAGTATAGCATACGGG
CGAAGGTGGTGGTCAACGCCACTGGCCACATGAGCGACAGCCTCCGCCAG
ATGGAGGATTCGGAAGCCAAGCCGCTCTGCACGCGCAGCTGGTCCTCGAT
CATCGTCATGCCCCGCTTCTACTGTCCGGAGGAGGTGGGCGTCTTCGACC
CGCACACGCCCTCTGGACGATCCATCTTTTTTCTGCCCTGGCAGGGGCAT
ACGCTAGTCGGGTCCAGCGATGAGCCTCTCAATCTGCCCGAGCAGGACAC
GCAGCCCACGGAGACGGATGTGCAGTCCCTACTGGATTGCGTTAAGCACT
TTGTAACGCCCAACTTCGATGTGCGAAGATGCGATGTGCTGGCCGTTTGG
GGTGGTTACAAACCTCTGCCCGTGCAGTCCGATACACTGCATCATACCCG
TTTCAAGAACCATGTAATCCAGCTAGGACCTCGAAACATGCTTTCCATCG
TTGGTGGCACGTGGTCGTCGTTTCGGGTTCTGGCTGAGAAAACCGTGAAT
GCAGCCATCCGGTATGGAGATCTTTCACCGCTGCGTAAGGAATCGGTGAC
CGCAGAGTCCTGCAAACTGGACGGAGCCAGTGGCTGGAGTCCGAAGATGT
TCATACGTCTGGTGCAGGACTTCGGAATGGAGCGGGACGTGGCTGAGCAC
CTGTCGAACACGTACGGATCGAATGCCTTCAAAGTGGCCGTGAGTGCGGA
CAGCAGTGGAAAGGCATGGCCCATTGTGGGTAAGCGCCTCCACTCGGAGT
TCCCGTATATTGAGGCGGAGGTAAAACAGGGCGTTCGAGACTTTGCTTGC
ACGCTGGAGGACATGGTGGCGCGGCGACTGCGAGTGGCCTTTCTAAATGT
CCAGGTGGCCGAGGAGATACTGCCGCAAGTGGCTAACATCATGGCCAAGG
AGCTGAACTGGTCGCGAGATCAAATTAAAAAGCAGATCCGCCAGACGCGA
ACTTTTCTTAACTCCCAGATGGGCCAGCTGACCAAGGAGAGCGCTTCGCA
GATGAGCATTCCCATTAAGATGAGCGTGCGCCAAGTGCGCAAGTTTGCCG
GGCAGTTCAGGCAAATGGATGATAACAATACGGGGTACGTGTCGATTGCA
GACTGCTGCAAGGCAATGAAAACGATGGGCGTAAAGGAGGTTCCCGTCGA
CCTGATGCACGATGTCCTGCGGGACATTGATGTCCATGCCCAGGGCAAGG
TGAACCTGTATGAGTTCCTCCTGCTCATGTCGGCTATTGTGCAGGGCAAC
ACCGAGTACCTGCGGTACGCACGGCTGTATCTGGACCACAAAAGGCAGAT
GCAAGGCAGCAACTTTCCCACCGTAATGCAAATGGAGCGTGCCGGGGGCG
GTCTTGCAAGCTTTCTAGACCAT
BO25557.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:57:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2137-RA | 2142 | CG2137-PA | 1..2139 | 17..2155 | 10575 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:57:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2137-RA | 2379 | CG2137-RA | 123..2262 | 16..2155 | 10580 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:57:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7536041..7538180 | 16..2155 | 10580 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:57:13 has no hits.
BO25557.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:00:48 Download gff for
BO25557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2137-RA | 124..2262 | 17..2157 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:25 Download gff for
BO25557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2137-RA | 124..2262 | 17..2157 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:38 Download gff for
BO25557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2137-RA | 124..2262 | 17..2157 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:38 Download gff for
BO25557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7536042..7538180 | 17..2157 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:25 Download gff for
BO25557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3423547..3425685 | 17..2157 | 99 | | Plus |
BO25557.pep Sequence
Translation from 16 to 2173
> BO25557.pep
MAKIIQMAVMLGSSKLGHGAFGFDERQADSTPVPQMKRELPTRKMCLEAF
KRTHYDILIIGGGAVGSGCALDAATRGLKTALVEANDFGSGTSSKSSKLL
HGGLRDLEQAISRLDVAAFRRVRCSLQERSHIGKLAPHLSQPVPILLPVH
HWWQAPLYYMKLKIYHLMAPKATRSFQYLSADDALEVFPMLRRQELFGAF
VFYEGQHDDARMCLSVALTAARYGADICNHMKVSRLIKNKDGNVAGAEAV
DQLTGKKYSIRAKVVVNATGHMSDSLRQMEDSEAKPLCTRSWSSIIVMPR
FYCPEEVGVFDPHTPSGRSIFFLPWQGHTLVGSSDEPLNLPEQDTQPTET
DVQSLLDCVKHFVTPNFDVRRCDVLAVWGGYKPLPVQSDTLHHTRFKNHV
IQLGPRNMLSIVGGTWSSFRVLAEKTVNAAIRYGDLSPLRKESVTAESCK
LDGASGWSPKMFIRLVQDFGMERDVAEHLSNTYGSNAFKVAVSADSSGKA
WPIVGKRLHSEFPYIEAEVKQGVRDFACTLEDMVARRLRVAFLNVQVAEE
ILPQVANIMAKELNWSRDQIKKQIRQTRTFLNSQMGQLTKESASQMSIPI
KMSVRQVRKFAGQFRQMDDNNTGYVSIADCCKAMKTMGVKEVPVDLMHDV
LRDIDVHAQGKVNLYEFLLLMSAIVQGNTEYLRYARLYLDHKRQMQGSNF
PTVMQMERAGGGLASFLDH
BO25557.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2137-PA | 713 | CG2137-PA | 1..713 | 1..713 | 3711 | 100 | Plus |
| Gpo-1-PD | 724 | CG8256-PD | 37..724 | 29..713 | 1659 | 45.8 | Plus |
| Gpo-1-PA | 724 | CG8256-PA | 37..724 | 29..713 | 1659 | 45.8 | Plus |
| Gpo-1-PB | 724 | CG8256-PB | 37..724 | 29..713 | 1659 | 45.8 | Plus |
| Gpo-1-PC | 724 | CG8256-PC | 37..724 | 29..713 | 1659 | 45.8 | Plus |
