BO25562.complete Sequence
619 bp assembled on 2010-06-28
GenBank Submission: KX799712
> BO25562.complete
GAAGTTATCAGTCGACATGGGTAAAAAGGGCAAAGGAAAGAAGGGCAAGA
AGCCCGCCGCAGTTGTGGCTCCCATCGAAGCGCCACCATGTCCTCCGTGT
CCGGAACCACCAAAGCAGATGCAACCACTTGACGCTTGTCCAGAGTCTAG
CGGACCCCACGATGTCCTTCGGGCTCAACCGAATCATTACCCGGCTCTTC
TTCGTATTCCGGAAACAATGGCGGTGGTGGGCTCTGAGAATGGATGCTAC
GATAGCATTTGCAAGCTCCTGAGAGCCGGATTCCGGTGTGCCGAGCGGGT
TTTCGTGATGGCCCCTTGGGGCAACTACGTGGTTTTCCGGTATCACAACA
ATAATGACTTTATTTACTTCCTGTTTGATGGATGCACCTGCGATGTTAAT
AGGTTCCGCTATCTAGACCTCAGCTGCGGAACTGCTGGATTTCTTTTCTT
CGATAATATGCACGACGTTATTAGTTATATTATCCAGTCTCGAAAGACGC
GTCTATATCTGGAGAATCTAAACAAGATTGCCATTGATCAGATTGTGGAG
GAGTATGGCGCTGTAACGTACACCCAAAAGGCAAAATGCATGCGATTCGC
TGCAAGCTTTCTAGACCAT
BO25562.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12470-RA | 588 | CG12470-PA | 1..585 | 17..601 | 2925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:52:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12470-RA | 1055 | CG12470-RA | 327..912 | 16..601 | 2930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:52:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 308207..308792 | 16..601 | 2930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:52:01 has no hits.
BO25562.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:24 Download gff for
BO25562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12470-RA | 328..912 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:19 Download gff for
BO25562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12470-RA | 328..912 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:28 Download gff for
BO25562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12470-RA | 328..912 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:28 Download gff for
BO25562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 308208..308792 | 17..603 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:19 Download gff for
BO25562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 202241..202825 | 17..603 | 99 | | Plus |
BO25562.pep Sequence
Translation from 16 to 619
> BO25562.pep
MGKKGKGKKGKKPAAVVAPIEAPPCPPCPEPPKQMQPLDACPESSGPHDV
LRAQPNHYPALLRIPETMAVVGSENGCYDSICKLLRAGFRCAERVFVMAP
WGNYVVFRYHNNNDFIYFLFDGCTCDVNRFRYLDLSCGTAGFLFFDNMHD
VISYIIQSRKTRLYLENLNKIAIDQIVEEYGAVTYTQKAKCMRFAASFLD
H
BO25562.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:15:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12470-PA | 195 | CG12470-PA | 1..195 | 1..195 | 1070 | 100 | Plus |
ms(3)76Cc-PA | 1174 | CG9392-PA | 1018..1151 | 30..162 | 287 | 42.6 | Plus |