Clone BO25573 Report

Search the DGRC for BO25573

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG33189-RA
Protein status:BO25573.pep: Imported from assembly
Sequenced Size:565

Clone Sequence Records

BO25573.complete Sequence

565 bp assembled on 2010-06-28

GenBank Submission: KX798777

> BO25573.complete
GAAGTTATCAGTCGACATGATTGGCGAGTTTGAGGACTTAGACATCTTTT
ATGACTGCCGCAGTGACGACGAGGAGACTCCAGATCTGGAAGTGGGCGGT
GGTGATGAAGTGATCTGCAAGCAAGCGCCTCGATTTGACGATCCTGTCCA
GATTCGGGCCGTTTTGGAGCGGGCAGCCACTGCCACCCAGCGGTTGCTAA
GGTGCTACGGAGGCACTGATTCCGTGCCAACTCGTCCTTTGATGACACTT
TTCTATCCGGCCACCCTGGAGGTCAGTGCCCGTCTACATACGGACGACAA
GTGTCCTTGCCCCAAGGACAGGCAGTGCAAGTTAATCGGCGACCCAGTGA
CCCTGAGGCTGCCAATCGAACTGAATCCGGAAAGCGGCCAGGTCAAAGTC
AACATCTTCCAGCCCAAGTCAATTGGCACATTTTGTGGATGCAATGCACC
TGGAAATCAGAACAAGTCGAAGAGCAGAAGATCGAGTGTAAAGTGGTCCA
ACAAGGATGAAGTGTGTCCCGATTGCCAGGAACCTAATCAAAACACGGCA
AGCTTTCTAGACCAT

BO25573.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG33189-RA 534 CG33189-PA 1..531 17..547 2655 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG33189-RA 677 CG33189-RA 58..588 17..547 2655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8780202..8780732 547..17 2655 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:51:08 has no hits.

BO25573.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:58 Download gff for BO25573.complete
Subject Subject Range Query Range Percent Splice Strand
CG33189-RA 58..588 17..549 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:00 Download gff for BO25573.complete
Subject Subject Range Query Range Percent Splice Strand
CG33189-RA 58..588 17..549 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:07 Download gff for BO25573.complete
Subject Subject Range Query Range Percent Splice Strand
CG33189-RA 58..588 17..549 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:07 Download gff for BO25573.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8780200..8780732 17..549 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:00 Download gff for BO25573.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4605922..4606454 17..549 99   Minus

BO25573.pep Sequence

Translation from 16 to 565

> BO25573.pep
MIGEFEDLDIFYDCRSDDEETPDLEVGGGDEVICKQAPRFDDPVQIRAVL
ERAATATQRLLRCYGGTDSVPTRPLMTLFYPATLEVSARLHTDDKCPCPK
DRQCKLIGDPVTLRLPIELNPESGQVKVNIFQPKSIGTFCGCNAPGNQNK
SKSRRSSVKWSNKDEVCPDCQEPNQNTASFLDH

BO25573.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG33189-PA 177 CG33189-PA 1..177 1..177 961 100 Plus
CG33191-PA 476 CG33191-PA 56..157 9..126 162 41 Plus