BO25575.complete Sequence
1252 bp assembled on 2010-06-28
GenBank Submission: KX794578
> BO25575.complete
GAAGTTATCAGTCGACATGTTCTGCACGGAGAGCTGTGAGCACGGATGCA
ATGCAACCTCGTCGGGCAAGCTGATCGCCAATGGAAACGGTGGCGGCCTG
CAGTCGCAGGGAAATTCACAGCATCAGTTCACCATGTCCTACGCTCCACT
GTCGACCAACGATGTGCCCTCCAAGTCCGAGGTGGAACCACCGCGACTGG
GCATGTGCCTGGTCACCGAGTGTCCAGAGGGTCTGAGCATTGACTGCAAT
GTGCCACTGCCGAATTCTTTCAATTTGGATGAATACAAAAATCACATGAT
CTGCTCGAGCTGTACCCAGTTCAATGGTGGCTTGGACAGATTTGGCCAGC
CAGGTACAGCCGGTCCAAGTGCCAGTCCTAGTGCCAATCCATATCCAACT
CCGATGCCCAATCCCATCCAGGCCTCTCCTTGCAGCTTTCATGGCCAGTG
TTGTTCAGCCGGTGGACCATGCGCTGGATATGATTCGCAGCCAAATCCAT
CAAGATGCTATCGACAGGAATCATCGTTGGCTCAAGGAGCCCCAGCGATG
CCGCAGATCTTTTGCCTGGCACCACCCAGTTCCCATGGTGGCTTAAATCA
GCCCGTTTACTTGTGCAGCCTGATTCCAGTTCCGCCATCGTGGAACCTGG
TGCCGCTGGCCCAACCGCAGCACTTGACGCATCAGCAGCTGCTGACGAAT
CCCGCACAGGACTCGCAGCTGCCGTTGCAGCAATTGGTGCAGTACGACCT
GTCCTTCAATCGCCTGCTGGCCGAATTGCGCAAGGAACGGGAGAGGTCCT
GTTGTGACCTGCAGATCCCCCAGCCTCTGGCTTTCCAGCTGTATGCGCCC
ACGGTTAGGTTTCTTGATCAGCCAGATTCCAGTTCGGCGAAGAGAGAGCC
TCATTGCCCGCCGGCAGCTCCTTGTGCTCCTCCAGCTGCACCACCACAAC
CACCATCCTCGTCATCATCCCCAACAGCCACATCTGCCTCCGCCGCCGGG
CTGCCCAGAGCTCGTTCGGCCAGCCCGAAGCGCAGTCGTTCGTGTCTCCG
GAACAAGGATCTCTGGGACAGTGGCGGATCCGTACCAGGTCCATCCCCCT
GCTCCTCGCCCACCCAACATGCGACCGGAAATGTGTGCATGAAGTGCGGA
AACTGCTGGCATTGTCCGCGCTGCAACTGCTCCAACTGCTTCTGGCATCC
CGGCTTGGTGCGAGCTCCTCCAAGAGATGGTCGCGCAAGCTTTCTAGACC
AT
BO25575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hale-RA | 1221 | CG7570-PA | 1..1218 | 17..1234 | 6060 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hale-RA | 1384 | CG7570-RA | 94..1311 | 17..1234 | 6060 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19984499..19985497 | 1234..236 | 4965 | 99.8 | Minus |
3L | 28110227 | 3L | 19985555..19985775 | 237..17 | 1105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:51:02 has no hits.
BO25575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:53 Download gff for
BO25575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hale-RA | 99..1311 | 22..1236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:58 Download gff for
BO25575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hale-RA | 99..1311 | 22..1236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:06 Download gff for
BO25575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hale-RA | 99..1311 | 22..1236 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:06 Download gff for
BO25575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19984497..19985495 | 238..1236 | 99 | <- | Minus |
3L | 19985555..19985770 | 22..237 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:58 Download gff for
BO25575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19977597..19978595 | 238..1236 | 99 | <- | Minus |
arm_3L | 19978655..19978870 | 22..237 | 100 | | Minus |
BO25575.pep Sequence
Translation from 16 to 1252
> BO25575.pep
MFCTESCEHGCNATSSGKLIANGNGGGLQSQGNSQHQFTMSYAPLSTNDV
PSKSEVEPPRLGMCLVTECPEGLSIDCNVPLPNSFNLDEYKNHMICSSCT
QFNGGLDRFGQPGTAGPSASPSANPYPTPMPNPIQASPCSFHGQCCSAGG
PCAGYDSQPNPSRCYRQESSLAQGAPAMPQIFCLAPPSSHGGLNQPVYLC
SLIPVPPSWNLVPLAQPQHLTHQQLLTNPAQDSQLPLQQLVQYDLSFNRL
LAELRKERERSCCDLQIPQPLAFQLYAPTVRFLDQPDSSSAKREPHCPPA
APCAPPAAPPQPPSSSSSPTATSASAAGLPRARSASPKRSRSCLRNKDLW
DSGGSVPGPSPCSSPTQHATGNVCMKCGNCWHCPRCNCSNCFWHPGLVRA
PPRDGRASFLDH
BO25575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hale-PA | 406 | CG7570-PA | 1..406 | 1..406 | 2267 | 100 | Plus |