Clone BO25575 Report

Search the DGRC for BO25575

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:75
Vector:pDNR-Dual
Associated Gene/Transcripthale-RA
Protein status:BO25575.pep: Imported from assembly
Sequenced Size:1252

Clone Sequence Records

BO25575.complete Sequence

1252 bp assembled on 2010-06-28

GenBank Submission: KX794578

> BO25575.complete
GAAGTTATCAGTCGACATGTTCTGCACGGAGAGCTGTGAGCACGGATGCA
ATGCAACCTCGTCGGGCAAGCTGATCGCCAATGGAAACGGTGGCGGCCTG
CAGTCGCAGGGAAATTCACAGCATCAGTTCACCATGTCCTACGCTCCACT
GTCGACCAACGATGTGCCCTCCAAGTCCGAGGTGGAACCACCGCGACTGG
GCATGTGCCTGGTCACCGAGTGTCCAGAGGGTCTGAGCATTGACTGCAAT
GTGCCACTGCCGAATTCTTTCAATTTGGATGAATACAAAAATCACATGAT
CTGCTCGAGCTGTACCCAGTTCAATGGTGGCTTGGACAGATTTGGCCAGC
CAGGTACAGCCGGTCCAAGTGCCAGTCCTAGTGCCAATCCATATCCAACT
CCGATGCCCAATCCCATCCAGGCCTCTCCTTGCAGCTTTCATGGCCAGTG
TTGTTCAGCCGGTGGACCATGCGCTGGATATGATTCGCAGCCAAATCCAT
CAAGATGCTATCGACAGGAATCATCGTTGGCTCAAGGAGCCCCAGCGATG
CCGCAGATCTTTTGCCTGGCACCACCCAGTTCCCATGGTGGCTTAAATCA
GCCCGTTTACTTGTGCAGCCTGATTCCAGTTCCGCCATCGTGGAACCTGG
TGCCGCTGGCCCAACCGCAGCACTTGACGCATCAGCAGCTGCTGACGAAT
CCCGCACAGGACTCGCAGCTGCCGTTGCAGCAATTGGTGCAGTACGACCT
GTCCTTCAATCGCCTGCTGGCCGAATTGCGCAAGGAACGGGAGAGGTCCT
GTTGTGACCTGCAGATCCCCCAGCCTCTGGCTTTCCAGCTGTATGCGCCC
ACGGTTAGGTTTCTTGATCAGCCAGATTCCAGTTCGGCGAAGAGAGAGCC
TCATTGCCCGCCGGCAGCTCCTTGTGCTCCTCCAGCTGCACCACCACAAC
CACCATCCTCGTCATCATCCCCAACAGCCACATCTGCCTCCGCCGCCGGG
CTGCCCAGAGCTCGTTCGGCCAGCCCGAAGCGCAGTCGTTCGTGTCTCCG
GAACAAGGATCTCTGGGACAGTGGCGGATCCGTACCAGGTCCATCCCCCT
GCTCCTCGCCCACCCAACATGCGACCGGAAATGTGTGCATGAAGTGCGGA
AACTGCTGGCATTGTCCGCGCTGCAACTGCTCCAACTGCTTCTGGCATCC
CGGCTTGGTGCGAGCTCCTCCAAGAGATGGTCGCGCAAGCTTTCTAGACC
AT

BO25575.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
hale-RA 1221 CG7570-PA 1..1218 17..1234 6060 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
hale-RA 1384 CG7570-RA 94..1311 17..1234 6060 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19984499..19985497 1234..236 4965 99.8 Minus
3L 28110227 3L 19985555..19985775 237..17 1105 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:51:02 has no hits.

BO25575.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:53 Download gff for BO25575.complete
Subject Subject Range Query Range Percent Splice Strand
hale-RA 99..1311 22..1236 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:58 Download gff for BO25575.complete
Subject Subject Range Query Range Percent Splice Strand
hale-RA 99..1311 22..1236 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:06 Download gff for BO25575.complete
Subject Subject Range Query Range Percent Splice Strand
hale-RA 99..1311 22..1236 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:06 Download gff for BO25575.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19984497..19985495 238..1236 99 <- Minus
3L 19985555..19985770 22..237 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:58 Download gff for BO25575.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19977597..19978595 238..1236 99 <- Minus
arm_3L 19978655..19978870 22..237 100   Minus

BO25575.pep Sequence

Translation from 16 to 1252

> BO25575.pep
MFCTESCEHGCNATSSGKLIANGNGGGLQSQGNSQHQFTMSYAPLSTNDV
PSKSEVEPPRLGMCLVTECPEGLSIDCNVPLPNSFNLDEYKNHMICSSCT
QFNGGLDRFGQPGTAGPSASPSANPYPTPMPNPIQASPCSFHGQCCSAGG
PCAGYDSQPNPSRCYRQESSLAQGAPAMPQIFCLAPPSSHGGLNQPVYLC
SLIPVPPSWNLVPLAQPQHLTHQQLLTNPAQDSQLPLQQLVQYDLSFNRL
LAELRKERERSCCDLQIPQPLAFQLYAPTVRFLDQPDSSSAKREPHCPPA
APCAPPAAPPQPPSSSSSPTATSASAAGLPRARSASPKRSRSCLRNKDLW
DSGGSVPGPSPCSSPTQHATGNVCMKCGNCWHCPRCNCSNCFWHPGLVRA
PPRDGRASFLDH

BO25575.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
hale-PA 406 CG7570-PA 1..406 1..406 2267 100 Plus