BO25577.complete Sequence
1108 bp assembled on 2010-06-28
GenBank Submission: KX794131
> BO25577.complete
GAAGTTATCAGTCGACATGGGAATCCTGCAGGCGAGGAGGCATCACTGCG
TCGACAAGGTGGTGAGTGACCTGTGCCTGGGACACTACGAGCACGCTCTG
AGGCAGATCAACGAGGATCTGGAAGGTTTACAGAACCACGATGAGATCAT
GGCGCTGCTGGAGCTAAAGAATATCATTTTGAGACTGAGGTTGAAGGGCG
AGGCCCAGCGGACCATAGGCCCAACTCGCAAATCTGACGCCCTGCCCCAC
AAGTTCACACTCGAGATGCTGGACGTGGTGCAGAAGGTCCTGCGGTGCCG
CAATCACTACGAGGTGCTGCGCATCTCTCATCATGCCACCTACTCCGAGG
TGAAGCGGGCCTACCACAAGCTGGCCCTGCGCCTCCATCCGGACAAGAAC
AAATCTCCTGGGGCTGAGCAGGCCTTCCGGCGGATCAGCGAGGCGGCTGA
CTGCCTCACGGACTGCCAGAAAAGGATTGAGTACAACATAGCAACGGCAG
TGGGCGACTGCCACGACCAGGATCCCTCGCAGTACAAGGATTATCGCGGG
GAAAGTGAATTCAATGAGGCAAATGGGAACGATCTGGGAGCCGCTTTCAG
AAGGCCTTATCGGGGGGCCAATCAGCGGATGCCCCAGAGGCAGTCACTCT
ACCAAACACAGCAACTCGTCATCGGAGTGGTGGCTGCTCTGGTTTTTCTC
TTCGTCACCATGCACTTCATCGCAGGCGCTCCTGCTTACAGTTTTACGCT
AACCAGAACCCATAGCGCTCGTCGGCTCAGTCGGACGAACCACATTGCCT
ACTACATGAATCCGACGACTCTGTCCAAGTACACAGAACAGCAGTTGGCC
GAACTGGAAGTAGAAATCGAGGAGGTTTACATCTCGGACCTCAAACATAA
GTGCAGGCAAGAGCGGAGTTGGAGGGATAATCTGTTTCTCAGGGCGAGGC
AGGGAAACAACGACCAGAAGTTGCTCCAGCATGTCAGCCAGATGTCCACT
CCCGCTTGCCAGGCGTTGCTCCAGCTGGGAAAGTCTGGTCACAGTCGACT
GTTGCTCGAGAACGAGTCTTTGAATCAGGACGTGCCAGTCGCAAGCTTTC
TAGACCAT
BO25577.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30156-RB | 1077 | CG30156-PB | 1..1074 | 17..1090 | 5310 | 99.6 | Plus |
CG30156-RA | 1077 | CG30156-PA | 1..1074 | 17..1090 | 5310 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30156-RB | 1489 | CG30156-RB | 343..1416 | 17..1090 | 5310 | 99.6 | Plus |
CG30156-RA | 1425 | CG30156-RA | 279..1352 | 17..1090 | 5310 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6981969..6982708 | 756..17 | 3670 | 99.7 | Minus |
2R | 25286936 | 2R | 6981519..6981685 | 1090..924 | 835 | 100 | Minus |
2R | 25286936 | 2R | 6981742..6981913 | 924..753 | 830 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:50:57 has no hits.
BO25577.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:52 Download gff for
BO25577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30156-RA | 279..1352 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:55 Download gff for
BO25577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30156-RA | 279..1352 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:04 Download gff for
BO25577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30156-RA | 279..1352 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:04 Download gff for
BO25577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6981516..6981685 | 924..1092 | 98 | <- | Minus |
2R | 6981743..6981909 | 757..923 | 98 | <- | Minus |
2R | 6981969..6982708 | 17..756 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:55 Download gff for
BO25577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2869021..2869190 | 924..1092 | 98 | <- | Minus |
arm_2R | 2869248..2869414 | 757..923 | 98 | <- | Minus |
arm_2R | 2869474..2870213 | 17..756 | 99 | | Minus |
BO25577.pep Sequence
Translation from 16 to 1108
> BO25577.pep
MGILQARRHHCVDKVVSDLCLGHYEHALRQINEDLEGLQNHDEIMALLEL
KNIILRLRLKGEAQRTIGPTRKSDALPHKFTLEMLDVVQKVLRCRNHYEV
LRISHHATYSEVKRAYHKLALRLHPDKNKSPGAEQAFRRISEAADCLTDC
QKRIEYNIATAVGDCHDQDPSQYKDYRGESEFNEANGNDLGAAFRRPYRG
ANQRMPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHS
ARRLSRTNHIAYYMNPTTLSKYTEQQLAELEVEIEEVYISDLKHKCRQER
SWRDNLFLRARQGNNDQKLLQHVSQMSTPACQALLQLGKSGHSRLLLENE
SLNQDVPVASFLDH
BO25577.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30156-PB | 358 | CG30156-PB | 1..358 | 1..358 | 1866 | 100 | Plus |
CG30156-PA | 358 | CG30156-PA | 1..358 | 1..358 | 1866 | 100 | Plus |
CG3061-PA | 370 | CG3061-PA | 11..364 | 11..334 | 364 | 29.2 | Plus |
CG2887-PA | 342 | CG2887-PA | 3..65 | 95..157 | 163 | 46 | Plus |
DnaJ-1-PA | 334 | CG10578-PA | 3..61 | 95..153 | 158 | 49.2 | Plus |