Clone BO25577 Report

Search the DGRC for BO25577

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG30156-RA
Protein status:BO25577.pep: Imported from assembly
Sequenced Size:1108

Clone Sequence Records

BO25577.complete Sequence

1108 bp assembled on 2010-06-28

GenBank Submission: KX794131

> BO25577.complete
GAAGTTATCAGTCGACATGGGAATCCTGCAGGCGAGGAGGCATCACTGCG
TCGACAAGGTGGTGAGTGACCTGTGCCTGGGACACTACGAGCACGCTCTG
AGGCAGATCAACGAGGATCTGGAAGGTTTACAGAACCACGATGAGATCAT
GGCGCTGCTGGAGCTAAAGAATATCATTTTGAGACTGAGGTTGAAGGGCG
AGGCCCAGCGGACCATAGGCCCAACTCGCAAATCTGACGCCCTGCCCCAC
AAGTTCACACTCGAGATGCTGGACGTGGTGCAGAAGGTCCTGCGGTGCCG
CAATCACTACGAGGTGCTGCGCATCTCTCATCATGCCACCTACTCCGAGG
TGAAGCGGGCCTACCACAAGCTGGCCCTGCGCCTCCATCCGGACAAGAAC
AAATCTCCTGGGGCTGAGCAGGCCTTCCGGCGGATCAGCGAGGCGGCTGA
CTGCCTCACGGACTGCCAGAAAAGGATTGAGTACAACATAGCAACGGCAG
TGGGCGACTGCCACGACCAGGATCCCTCGCAGTACAAGGATTATCGCGGG
GAAAGTGAATTCAATGAGGCAAATGGGAACGATCTGGGAGCCGCTTTCAG
AAGGCCTTATCGGGGGGCCAATCAGCGGATGCCCCAGAGGCAGTCACTCT
ACCAAACACAGCAACTCGTCATCGGAGTGGTGGCTGCTCTGGTTTTTCTC
TTCGTCACCATGCACTTCATCGCAGGCGCTCCTGCTTACAGTTTTACGCT
AACCAGAACCCATAGCGCTCGTCGGCTCAGTCGGACGAACCACATTGCCT
ACTACATGAATCCGACGACTCTGTCCAAGTACACAGAACAGCAGTTGGCC
GAACTGGAAGTAGAAATCGAGGAGGTTTACATCTCGGACCTCAAACATAA
GTGCAGGCAAGAGCGGAGTTGGAGGGATAATCTGTTTCTCAGGGCGAGGC
AGGGAAACAACGACCAGAAGTTGCTCCAGCATGTCAGCCAGATGTCCACT
CCCGCTTGCCAGGCGTTGCTCCAGCTGGGAAAGTCTGGTCACAGTCGACT
GTTGCTCGAGAACGAGTCTTTGAATCAGGACGTGCCAGTCGCAAGCTTTC
TAGACCAT

BO25577.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG30156-RB 1077 CG30156-PB 1..1074 17..1090 5310 99.6 Plus
CG30156-RA 1077 CG30156-PA 1..1074 17..1090 5310 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG30156-RB 1489 CG30156-RB 343..1416 17..1090 5310 99.6 Plus
CG30156-RA 1425 CG30156-RA 279..1352 17..1090 5310 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6981969..6982708 756..17 3670 99.7 Minus
2R 25286936 2R 6981519..6981685 1090..924 835 100 Minus
2R 25286936 2R 6981742..6981913 924..753 830 98.8 Minus
Blast to na_te.dros performed on 2014-11-28 08:50:57 has no hits.

BO25577.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:52 Download gff for BO25577.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 279..1352 17..1092 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:55 Download gff for BO25577.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 279..1352 17..1092 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:04 Download gff for BO25577.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 279..1352 17..1092 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:04 Download gff for BO25577.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6981516..6981685 924..1092 98 <- Minus
2R 6981743..6981909 757..923 98 <- Minus
2R 6981969..6982708 17..756 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:55 Download gff for BO25577.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2869021..2869190 924..1092 98 <- Minus
arm_2R 2869248..2869414 757..923 98 <- Minus
arm_2R 2869474..2870213 17..756 99   Minus

BO25577.pep Sequence

Translation from 16 to 1108

> BO25577.pep
MGILQARRHHCVDKVVSDLCLGHYEHALRQINEDLEGLQNHDEIMALLEL
KNIILRLRLKGEAQRTIGPTRKSDALPHKFTLEMLDVVQKVLRCRNHYEV
LRISHHATYSEVKRAYHKLALRLHPDKNKSPGAEQAFRRISEAADCLTDC
QKRIEYNIATAVGDCHDQDPSQYKDYRGESEFNEANGNDLGAAFRRPYRG
ANQRMPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHS
ARRLSRTNHIAYYMNPTTLSKYTEQQLAELEVEIEEVYISDLKHKCRQER
SWRDNLFLRARQGNNDQKLLQHVSQMSTPACQALLQLGKSGHSRLLLENE
SLNQDVPVASFLDH

BO25577.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG30156-PB 358 CG30156-PB 1..358 1..358 1866 100 Plus
CG30156-PA 358 CG30156-PA 1..358 1..358 1866 100 Plus
CG3061-PA 370 CG3061-PA 11..364 11..334 364 29.2 Plus
CG2887-PA 342 CG2887-PA 3..65 95..157 163 46 Plus
DnaJ-1-PA 334 CG10578-PA 3..61 95..153 158 49.2 Plus