BO25578.complete Sequence
379 bp assembled on 2010-06-28
GenBank Submission: KX795901
> BO25578.complete
GAAGTTATCAGTCGACATGGCAGTGCGCTACGAGCTGGCTATTGGCCTGA
ACAAGGGCCACAAGACCTCGAAGATCAGGAATGTGAAGTACACCGGCGAC
AAGAAGGTCAAGGGTCTGCGCGGATCGCGCTTGAAGAACATCCAAACCCG
CCACACCAAGTTCATGCGCGACTTGGTCCGCGAGGTCGTTGGCCACGCTC
CCTATGAGAAGCGCACCATGGAGTTGCTGAAGGTGTCCAAGGATAAGAGG
GCCCTGAAGTTCCTCAAGCGCCGCCTGGGCACCCACATCCGTGCCAAGAG
GAAGCGTGAGGAGTTGTCCAACATCCTCACCCAGCTGAGGAAGGCCCAGA
CCCACGCCAAGGCAAGCTTTCTAGACCAT
BO25578.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36-RE | 348 | CG7622-PE | 1..345 | 17..361 | 1725 | 100 | Plus |
RpL36-RC | 348 | CG7622-PC | 1..345 | 17..361 | 1725 | 100 | Plus |
RpL36-RD | 348 | CG7622-PD | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:50:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36-RE | 493 | CG7622-RE | 22..366 | 17..361 | 1725 | 100 | Plus |
RpL36-RC | 592 | CG7622-RC | 132..476 | 17..361 | 1725 | 100 | Plus |
RpL36-RD | 535 | CG7622-RD | 75..419 | 17..361 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 628465..628686 | 361..140 | 1110 | 100 | Minus |
X | 23542271 | X | 628751..628873 | 139..17 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:50:51 has no hits.
BO25578.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:48 Download gff for
BO25578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36-RB | 88..432 | 17..363 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:53 Download gff for
BO25578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36-RB | 95..439 | 17..363 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:03 Download gff for
BO25578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36-RD | 75..419 | 17..363 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:03 Download gff for
BO25578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 628463..628686 | 140..363 | 99 | <- | Minus |
X | 628751..628873 | 17..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:53 Download gff for
BO25578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 522496..522719 | 140..363 | 99 | <- | Minus |
arm_X | 522784..522906 | 17..139 | 100 | | Minus |
BO25578.pep Sequence
Translation from 16 to 379
> BO25578.pep
MAVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFM
RDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL
SNILTQLRKAQTHAKASFLDH
BO25578.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36-PE | 115 | CG7622-PE | 1..115 | 1..115 | 578 | 100 | Plus |
RpL36-PC | 115 | CG7622-PC | 1..115 | 1..115 | 578 | 100 | Plus |
RpL36-PD | 115 | CG7622-PD | 1..115 | 1..115 | 578 | 100 | Plus |
RpL36-PB | 115 | CG7622-PB | 1..115 | 1..115 | 578 | 100 | Plus |
RpL36-PA | 115 | CG7622-PA | 1..115 | 1..115 | 578 | 100 | Plus |