Clone BO25582 Report

Search the DGRC for BO25582

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG11526-RA
Protein status:BO25582.pep: Imported from assembly
Sequenced Size:2680

Clone Sequence Records

BO25582.complete Sequence

2680 bp assembled on 2010-07-15

GenBank Submission: KX799207

> BO25582.complete
GAAGTTATCAGTCGACATGATGCTCACATCCATAAACAACTCCTTTGAGC
AGGACACCCACGATGCGGACGCCAACTGCGACGGGCCCGACCTGGACTTC
GTGTACGCGGACGTGGATGGCTATCAGAACGAGATCGCTGAACTGTATAG
CTACACGGAGTTCAGCGAGTTTCAGATGAACGTGAAGGCCTTCGAGGACC
AGATGGAGCTGTACGACCTGCCGCCCAACTGGCAGAAGCAGGACTCCGCC
TCCCAGCGCGGCATCGTGATGAAGCTGGTGGACCAGCTGGAGGTCTCCGA
TCGATCCTTTCGCATGCAGGCCGCCCGGTGCATCCTTTACCTGGCCCAAG
GCTGCTGGGCGGAGGTTCAGTCGGACGAGGAGCAGCACCAGATCACCAGG
GACAATGTGCTGGTGCTCTACCAACTCGGCGTCTTCGCCTCCTTCATCGA
CCTGCTCAACATGGAGATCGAAAGCGCCTGCTCTCCGGACATTGTGGCCG
TCAAGATCACTAACGTCACGCTTGTGGACTCCACGGACATTCGGGTGATC
CTATCTGTGCTCTACATCATCACAGAAACGATTCGCGATGAAAAGGAAAA
GGGCAGCGAAGACTACAGAGAGCTGGCCGACTCCTTTGTGCAAGAAATCA
ACTCACCACTACCAGATGGCGAACTTCTGGCCGTCAAGCTGTTGGGCATG
ATCACACGGTTTTGCAGTGGCGCAGCACCGCAGTTCCCCATGAAGAAGGT
TGTCCTCCTGCTGTGGAAAGTTTCGCTGCTGGGACTGGGAGGCATGGATG
TGCTCAAGAATCTCAAGAACGAGTATCGATTGAAGGTGGGTTTGGAACCC
ATCACCGAGGACACGCTGGAGGTTACCAAGTGCATGCGAGCCAGCTCACC
GCCGGCCACAGCTACTGATATACTGGAGAACCAGTATCCCAAGCGGAACT
TCAAACGCTCCCTGATGAAGCAGCGTTTTTTGGACGAGCCCGAGCAGATA
GACATGGAGATGGGCGGCAACGAGGGTCAAAATAATGCCAACAATGGCAG
CGGCAATGGCGGAAACGGGGAGGAGGAACTCTCTCAGTACTACAGACCCT
ACGATGACCCCTCTTCGTCCGCATCCACCACCTCGACGGCAAATCCAAAC
AACCAGCCTAGCCTAACACAGCCACCCGCTGCTGTGCCTCCGGTACAGAT
CACGGCTCGCCTGCCCTGGACGCCCAAGGTGCGACAAAAGGACATTGACC
AGTTTCTGGACATTTCGCGGAATAAGTTCATCGGGTATTCGCTGATTGGT
GACCACGAGAGTCTGGCTGGACTGCCGCAACCCATTCACGAGGGCTTTAA
GACGCTGCAGCGGCACATGTATATGAGCCTGGCCGATGTGCAAATCAAGA
AGGAGGAGGACATAGCTAGGAACCCCATTTCCACGCACGAAGACGAAATC
AAACTGACCCCGGCTGAGGTGTTGTACCAAGCCATCCTGCCAAACCTGCC
GCAGTATATGATCGCCCTCCTTAAGGTCCTGCTGGCAGCTTCGCCAACGT
CCAAGTCCAAGACGGAGAGCATTAACATAATGGCCGATGTGCTGCCTAGG
AAGATGCCGCTGACGGCCACCCAATCAACAAAGCTAACCGTCGACATTGG
TCGGCACAAGGAGATCATTGTGAAGGCTGTCTCGGCCATCATCCTGCTAT
ATTTAAAGCATTTCAAGATAAACCATGTTTACCAGTTTGAGTTCATGTCG
CAGCATCTCGTGTTCGCCAACTGCATCCCGCTGGTTTTGAAGTTCTTCAA
TCAGACAATCACGGAGTACGTGAACACCAAGAACTCCATTCCTCTGCTCG
ATTTCCCGTCGTGTGTGATTGGTGAGCAACCGGATTTGAGTGGCGATAGC
TTTGTGTATGGCGGAGAGATGTCCGATAAGTCCTACTCTTGGCGGAACGT
GTTCTCCTGCATAAACCTGCTGCGCATCCTCAACAAGCTGATCAAGTGGA
AGCACTCGCGAGTGATGATGCTGGTGGTATTCAAGTCGGCACCAATCCTG
AAGAAGACGCTTAAGGTGCGCCACGCCATGATGCAGCTGTACGTGCTGAA
GCTGCTCAAGATGCAGACCAAGTACTTGGGCCGCCAGTGGCGGAAGTCCA
ATATGAAGACCATGAGTGCAATTTACGCCAAGGTGCGGCATCGTCTAAAC
GACGATTGGGCCTTTGGCAACGACTTGGAGTCGCGTCCCTGGGACTTCCA
GGCGGAGGAGTGTACGCTGCGGGCCTGCGTGGATCGATTCAACCTGCGAC
GCTATCCGGAAGCCACCCAGAAGTGTGGAAACAACGGCACGGCAGCTCAG
AATGCGGAGAACGCCCAGCAATCCAACATGATGGCGGGCAACAATGGATG
TGGCAATAATGGCGACGCAAATGGCTATGGAAACAACGGTGGCGGTGGCA
ATGGCGGCCACAACCAGCAGCAGCAGCTCAACGACTATGGTGTGGAGGGT
GGCTTTCCCAGCGACGAGATCCTTACCCACTCGGACTTTGCCTTCTTCGG
TCACTCGGGTTGGTGGGATCGCAAGGTCGAGCTGACGGATTACTTCAAGG
CCAATTACGCGGTCTGGCTGGAGGAGGAGGTCTACAACAGTCAGACCGAC
TGGGACGCCCTCGCAAGCTTTCTAGACCAT

BO25582.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
Strip-RC 2649 CG11526-PC 1..2646 17..2662 13080 99.6 Plus
Strip-RA 2649 CG11526-PA 1..2646 17..2662 13080 99.6 Plus
Strip-RB 2784 CG11526-PB 171..2781 52..2662 12905 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:57:47
Subject Length Description Subject Range Query Range Score Percent Strand
Strip-RC 3792 CG11526-RC 310..2955 17..2662 13080 99.6 Plus
Strip-RA 3596 CG11526-RA 573..3218 17..2662 13080 99.6 Plus
Strip-RB 3161 CG11526-RB 173..2783 52..2662 12905 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3322929..3324636 2662..955 8390 99.4 Minus
3L 28110227 3L 3324700..3325637 954..17 4690 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:57:45 has no hits.

BO25582.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:00:50 Download gff for BO25582.complete
Subject Subject Range Query Range Percent Splice Strand
CG11526-RA 573..3218 17..2664 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:30 Download gff for BO25582.complete
Subject Subject Range Query Range Percent Splice Strand
CG11526-RA 573..3218 17..2664 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:49 Download gff for BO25582.complete
Subject Subject Range Query Range Percent Splice Strand
Strip-RA 573..3218 17..2664 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:49 Download gff for BO25582.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3322927..3324636 955..2664 99 <- Minus
3L 3324700..3325637 17..954 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:30 Download gff for BO25582.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3322927..3324636 955..2664 99 <- Minus
arm_3L 3324700..3325637 17..954 100   Minus

BO25582.pep Sequence

Translation from 16 to 2680

> BO25582.pep
MMLTSINNSFEQDTHDADANCDGPDLDFVYADVDGYQNEIAELYSYTEFS
EFQMNVKAFEDQMELYDLPPNWQKQDSASQRGIVMKLVDQLEVSDRSFRM
QAARCILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVFASFIDLLNME
IESACSPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDY
RELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLW
KVSLLGLGGMDVLKNLKNEYRLKVGLEPITEDTLEVTKCMRASSPPATAT
DILENQYPKRNFKRSLMKQRFLDEPEQIDMEMGGNEGQNNANNGSGNGGN
GEEELSQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPVQITARLP
WTPKVRQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIHEGFKTLQRH
MYMSLADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIA
LLKVLLAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEI
IVKAVSAIILLYLKHFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITE
YVNTKNSIPLLDFPSCVIGEQPDLSGDSFVYGGEMSDKSYSWRNVFSCIN
LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQ
TKYLGRQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECT
LRACVDRFNLRRYPEATQKCGNNGTAAQNAENAQQSNMMAGNNGCGNNGD
ANGYGNNGGGGNGGHNQQQQLNDYGVEGGFPSDEILTHSDFAFFGHSGWW
DRKVELTDYFKANYAVWLEEEVYNSQTDWDALASFLDH

BO25582.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
Strip-PC 882 CG11526-PC 1..882 1..882 4625 100 Plus
Strip-PA 882 CG11526-PA 1..882 1..882 4625 100 Plus
Strip-PB 927 CG11526-PB 54..927 9..882 4570 99.7 Plus