BO25586.complete Sequence
1471 bp assembled on 2010-06-28
GenBank Submission: KX798678
> BO25586.complete
GAAGTTATCAGTCGACATGCCATCACTAGCGGTGCCCCATCTAACTCCCA
TCTCTAATGAGCATTTAGTGTCTTCAAAAGAAGTTGTATTTTTCTGGAAA
AATCGCATTGAAATGTTTGAAAAGAAGAGCGACAAGGTTAAGCAAGCGGA
GCACAAGGCCCGGGATGATGGCGTAGAGCTGGAGAGCCAGTTTATCATGC
GCGTGCCGAAGGAACTGGCGGACACGGTCCATGAGGCAATAAATGCTGGC
ACCATTAAGGACCGGCTGACCATCCAACTGGATCCGGATCTGAGGTACGG
TGAAGTGCGAATAGATGATCAGATACTGTACACGAAACTCGTGGATTTGC
CCACCGTCGTCGAGAGCTACAAGACCATTGACAACAAGAGCTTCTACAAG
TCGGCAGACATCTGCCAAATACTCATTTGCAAGGAGGAGCGGGAGGACGA
GACGGAAAAGGAGTCGCCCAACAAGAACAAAAAGAAGGACCCCAACAAGG
TGGACAAAAAATACCTCTTTCCGCACGGCATCACACCGCCGTGCAAGAAT
GTGAGAAAACGACGATTCCGCAAAACTCTGAAGAAAAAGAATGTCGAAGC
TCCCGAGATTGAGAAGGAAGTGAAACATCTGCTGCGCATTGACAACGAGG
CTGTCAGAGTTGACTATGAAATCATAAACGAAGAGGACAAGCCAATGGAT
GAACTGGAGCAATCGGACATCAAACCCTACAACGATGCGGATGACGATTT
GCAGGACGAAAGCACCATGCATGCCAGCGAAAAGACGATCATGGAAATGA
GCTCCCAGCGGCACCTCCAAGTGGAGTCCGATGATGACGAAGCCAGCAAC
TTTCCCTCACACCGGGCGCCGAACATGGGAGTTGCTGTCCACGACATCTT
CGGCGAGGAAGTGTCCAGCACGGATGACGAGGATGAGCCCGATCGGGGCA
ATAACACCATGCAGCGGCGGGTGATGGAGGAATCCTCACGACTCTCGGCT
GATGATTCACGAATGTCGGACTTCTTTGGCGCTAGTGGCAGTAATACTGG
AGCGGGCGTAGTGAAAATGGAGCAGAACGTGTTCAGCAAGTCTATGTTTG
GGCATGAAGCCAGCAGTCCTAAGCTCAGCGCCGCCGGATCAAGCTCCAAC
CTTGCTGCTCCCAGTGGCTTCTACGATAGCCAAATGCTAGCCAAGCGCGA
GGAGTTCGAGAACATGGAATTCATAGACGAACCGCAGCCGCAGTACACGC
AGCAACAGGTCCAGCAGAAGATCAATCAACTGACGCGCCAGATTCGTGAA
CTGAAAGCGCAGCAGGTGCAAAAGTCAACGGAAATTGCTTCCATTCAGAA
TGCCACACTCAAACAACGAATGCAGGAAACGCTTGATAATCTCTACACAC
AGGTTATTGAAAGGGAATTGGAGCTGAAGGACTTCGAGAATATGCTGGAG
TCTGCAAGCTTTCTAGACCAT
BO25586.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf7-RA | 1440 | CG2670-PA | 1..1437 | 17..1453 | 7185 | 100 | Plus |
| Taf7-RB | 1344 | CG2670-PB | 1..1341 | 113..1453 | 6705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf7-RA | 2261 | CG2670-RA | 229..1665 | 17..1453 | 7185 | 100 | Plus |
| Taf7-RB | 1489 | CG2670-RB | 1..1424 | 30..1453 | 7120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7907878..7909125 | 206..1453 | 6225 | 99.9 | Plus |
| 3R | 32079331 | 3R | 7907625..7907820 | 17..212 | 980 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 08:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 3967..4006 | 100..139 | 128 | 80 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 1770..1809 | 100..139 | 119 | 77.5 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 3223..3262 | 100..139 | 119 | 77.5 | Plus |
BO25586.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:39 Download gff for
BO25586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf7-RA | 229..1665 | 17..1455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:44 Download gff for
BO25586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf7-RA | 229..1665 | 17..1455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:56 Download gff for
BO25586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf7-RA | 229..1665 | 17..1455 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:56 Download gff for
BO25586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7907625..7907819 | 17..211 | 100 | -> | Plus |
| 3R | 7907884..7909125 | 212..1455 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:44 Download gff for
BO25586.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3733347..3733541 | 17..211 | 100 | -> | Plus |
| arm_3R | 3733606..3734847 | 212..1455 | 99 | | Plus |
BO25586.pep Sequence
Translation from 16 to 1471
> BO25586.pep
MPSLAVPHLTPISNEHLVSSKEVVFFWKNRIEMFEKKSDKVKQAEHKARD
DGVELESQFIMRVPKELADTVHEAINAGTIKDRLTIQLDPDLRYGEVRID
DQILYTKLVDLPTVVESYKTIDNKSFYKSADICQILICKEEREDETEKES
PNKNKKKDPNKVDKKYLFPHGITPPCKNVRKRRFRKTLKKKNVEAPEIEK
EVKHLLRIDNEAVRVDYEIINEEDKPMDELEQSDIKPYNDADDDLQDEST
MHASEKTIMEMSSQRHLQVESDDDEASNFPSHRAPNMGVAVHDIFGEEVS
STDDEDEPDRGNNTMQRRVMEESSRLSADDSRMSDFFGASGSNTGAGVVK
MEQNVFSKSMFGHEASSPKLSAAGSSSNLAAPSGFYDSQMLAKREEFENM
EFIDEPQPQYTQQQVQQKINQLTRQIRELKAQQVQKSTEIASIQNATLKQ
RMQETLDNLYTQVIERELELKDFENMLESASFLDH
BO25586.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf7-PA | 479 | CG2670-PA | 1..479 | 1..479 | 2451 | 100 | Plus |
| Taf7-PB | 447 | CG2670-PB | 1..447 | 33..479 | 2283 | 100 | Plus |
