BO25587.complete Sequence
1201 bp assembled on 2010-06-28
GenBank Submission: KX796289
> BO25587.complete
GAAGTTATCAGTCGACATGATTGTGAAAATCAGCTGGCCCAAGAACAACA
TAACAAGCGAATGCTTCCGGCGGTTTGGATCTTTTAAAAGACGCTCAAAA
TCGAAGAAAATGTCAGCATTCATCGAGGAAACAAAAAGCCTGCTGCCGCG
GATCGCCTTCATAGCCTGCGGATGCTTCAGTCCACCCACACCCATGCACC
TTCGGATGTTCGAGATAGCCAAGGACCACTTCGAAATGCAGGGAACCCAC
AGAGTGGTAGGTGGCATCATCTCGCCCACGCACGACTCATATGGCAAAAA
GGGTCTGGCCTCCGCCTTGGACAGATGTGCCATGGTCAAGCTGGCCACCC
AGAGCTCCAATTGGATTCGGTTGTCCGATTGGGAGGTGCACCAGAATCAG
TGGATGCGCACGCAGGCGGTGCTCCAGCACCACCAGAACTATATCAATAA
CCACATAAATTCCGGCGGGGGAGGCGGAGATGACGGGGAGAACACACATC
TACCCGGATGGCTGCCTCGTGGGTTGCACGACAGTCGGGATCCTGTACAT
CTGAAGCTACTGTGCGGTGCCGATCTGCTGGAGTCCTTTGCTGTTCCAGG
CCTATGGGCAGAGGCCGATATTGAGGACATTGTGGCTAACCATGGTTTGG
TAGTTATCACCCGGGCCGGCTCAAACCCAGGAAAATTCATCTTTGACTCC
GACATATTGACCAAGTATCAGAGCAACATTACGCTAATCACCAACTGGGT
GCCTAATGAGGTGAGCTCCACGTTGATTCGGCGGCTCTTAGGACGCGGCC
AGTCGGTCAAGTACCTTCTAGACGATCTGGTGCTGGAGTACATCAAGCGC
CAACGATTGTTTAACTTTAAATCTAAGTATATAACGGATGCGGTGCGTCC
CAACCATTTGCTCTTTAACCACGCCTATACGGACAACAACAAGAACGCGA
ACAGCTACTCTATAGGCGACCAGCTGGAGCAGGACATGGACGAGTCGGAC
ACTCCAAGCCCGCAACTGCAGCATACGCCTACGTCGCGGGTTTTCTGCTG
CGGGGAGGTGCCTTTACGTGGATCCAAGGTGCTGCGATCCGGTCCTGGAC
AAGCGGTGCAGGTCATCACCATGCAGGCAGATGAGAAAGAGGAGAGCCAA
GCAAAGAAGCAGAAGATTTCCCAAGTGCAACTTGCAAGCTTTCTAGACCA
T
BO25587.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nmnat-RA | 1170 | CG13645-PA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
Nmnat-RC | 1077 | CG13645-PC | 1..1074 | 110..1183 | 5370 | 100 | Plus |
Nmnat-RB | 894 | CG13645-PB | 1..857 | 17..873 | 4285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:50:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nmnat-RA | 1287 | CG13645-RA | 22..1188 | 17..1183 | 5835 | 100 | Plus |
Nmnat-RC | 1214 | CG13645-RC | 1..1115 | 69..1183 | 5575 | 100 | Plus |
Nmnat-RB | 1236 | CG13645-RB | 22..878 | 17..873 | 4285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24945525..24945932 | 212..619 | 2040 | 100 | Plus |
3R | 32079331 | 3R | 24946884..24947154 | 874..1144 | 1355 | 100 | Plus |
3R | 32079331 | 3R | 24945258..24945453 | 17..212 | 980 | 100 | Plus |
3R | 32079331 | 3R | 24946140..24946295 | 718..873 | 780 | 100 | Plus |
3R | 32079331 | 3R | 24945984..24946085 | 620..721 | 510 | 100 | Plus |
3R | 32079331 | 3R | 24947261..24947301 | 1143..1183 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:50:20 has no hits.
BO25587.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:37 Download gff for
BO25587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nmnat-RA | 22..1188 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:41 Download gff for
BO25587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nmnat-RA | 22..1188 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:54 Download gff for
BO25587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nmnat-RA | 22..1188 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:54 Download gff for
BO25587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24946884..24947154 | 874..1144 | 100 | -> | Plus |
3R | 24947263..24947301 | 1145..1185 | 95 | | Plus |
3R | 24946144..24946295 | 722..873 | 100 | -> | Plus |
3R | 24945258..24945453 | 17..212 | 100 | -> | Plus |
3R | 24945526..24945932 | 213..619 | 100 | -> | Plus |
3R | 24945984..24946085 | 620..721 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:41 Download gff for
BO25587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20770980..20771175 | 17..212 | 100 | -> | Plus |
arm_3R | 20771248..20771654 | 213..619 | 100 | -> | Plus |
arm_3R | 20771706..20771807 | 620..721 | 100 | -> | Plus |
arm_3R | 20771866..20772017 | 722..873 | 100 | -> | Plus |
arm_3R | 20772606..20772876 | 874..1144 | 100 | -> | Plus |
arm_3R | 20772985..20773023 | 1145..1185 | 95 | | Plus |
BO25587.pep Sequence
Translation from 16 to 1201
> BO25587.pep
MIVKISWPKNNITSECFRRFGSFKRRSKSKKMSAFIEETKSLLPRIAFIA
CGCFSPPTPMHLRMFEIAKDHFEMQGTHRVVGGIISPTHDSYGKKGLASA
LDRCAMVKLATQSSNWIRLSDWEVHQNQWMRTQAVLQHHQNYINNHINSG
GGGGDDGENTHLPGWLPRGLHDSRDPVHLKLLCGADLLESFAVPGLWAEA
DIEDIVANHGLVVITRAGSNPGKFIFDSDILTKYQSNITLITNWVPNEVS
STLIRRLLGRGQSVKYLLDDLVLEYIKRQRLFNFKSKYITDAVRPNHLLF
NHAYTDNNKNANSYSIGDQLEQDMDESDTPSPQLQHTPTSRVFCCGEVPL
RGSKVLRSGPGQAVQVITMQADEKEESQAKKQKISQVQLASFLDH
BO25587.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nmnat-PA | 389 | CG13645-PA | 1..389 | 1..389 | 2061 | 100 | Plus |
Nmnat-PC | 358 | CG13645-PC | 1..358 | 32..389 | 1897 | 100 | Plus |
Nmnat-PB | 297 | CG13645-PB | 1..287 | 1..287 | 1526 | 99.7 | Plus |