BO25588.complete Sequence
934 bp assembled on 2010-06-28
GenBank Submission: KX799334
> BO25588.complete
GAAGTTATCAGTCGACATGAGGTTTCGGTCGCTGAAGAACATATGGCCAA
AAGAGAAGTTGGAGCAATTCCTATTTTTGTTCATTTTATGTGGCTTGCCC
GCCATATACTATGTTCTAATGGAGATAATTCTGCCGGAGTTGTCGGATTA
TTGGTCACCTGGTTACGTATTTCAGCTGCTGCTGGGACTGTTCCTCTTTT
CGAATGTGATGTCCAACTATGTCATGTGCATCCTGGTGGACCCCAGCATC
GATCCCAAGCTTATGAAGAATCAGTTGGTGCGCGGACAGCACAGTGAGGA
CTGGCACGAGTGCGACAAGTGCGGGATTCTTGCTCCACCCCGGTCACGTC
ACTGCAGGAAGTGTGGCGTCTGTGTCCTGATGCGAGATCATCACTGCTTC
TTTACTGGTTGCTGCATCGGTCATGAGAACTATAGATACTTTTTCTATTT
TCTTATCTACTTCTTTCTAAGCTGCATGATTTCACTAACGTCATCTTCGA
TATTTATTTACGTTCTGCATGGGGGCAGATACCAGCTCTTTATGCTGACA
CATCCCGCACCGAACTCTGCCTATTTTAACTCGCTTATTATCAGGATAAT
CTACTTTAAGTTGCCCGATATATACGAGCTGGTGTTCACTCTGGTATTCG
TCCTGCTGTGGATCGGGGTATGCGTAGCTACCTATGTGGCTTATGATCAG
TGGTCTCGTGGCTATTTTTGCTATGATTTTGAACTTCAAAACATTCCTTT
TGACCGAAAACTGCGCCGAAACTTCAAGACGTTCTTGGGCAGGCGAATGA
AGTGGACCTGGATCTCCGGATTTGTTCCCAGCCAGCTGGACCACGACGGA
TTTGATCTGGATCCCGACAACGAACGTGTGGCAGATTGGTGCTCAGAAAC
AACCATCAAGGATGGCGCAAGCTTTCTAGACCAT
BO25588.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18810-RA | 903 | CG18810-PA | 1..900 | 17..916 | 4485 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:50:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18810-RA | 1168 | CG18810-RA | 126..1025 | 17..916 | 4485 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20649037..20649936 | 17..916 | 4485 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:50:14 has no hits.
BO25588.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:34 Download gff for
BO25588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18810-RA | 16..915 | 17..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:38 Download gff for
BO25588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18810-RA | 126..1025 | 17..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:53 Download gff for
BO25588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18810-RA | 126..1025 | 17..918 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:53 Download gff for
BO25588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20649037..20649936 | 17..918 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:38 Download gff for
BO25588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20649037..20649936 | 17..918 | 99 | | Plus |
BO25588.pep Sequence
Translation from 16 to 934
> BO25588.pep
MRFRSLKNIWPKEKLEQFLFLFILCGLPAIYYVLMEIILPELSDYWSPGY
VFQLLLGLFLFSNVMSNYVMCILVDPSIDPKLMKNQLVRGQHSEDWHECD
KCGILAPPRSRHCRKCGVCVLMRDHHCFFTGCCIGHENYRYFFYFLIYFF
LSCMISLTSSSIFIYVLHGGRYQLFMLTHPAPNSAYFNSLIIRIIYFKLP
DIYELVFTLVFVLLWIGVCVATYVAYDQWSRGYFCYDFELQNIPFDRKLR
RNFKTFLGRRMKWTWISGFVPSQLDHDGFDLDPDNERVADWCSETTIKDG
ASFLDH
BO25588.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18810-PA | 300 | CG18810-PA | 1..300 | 1..300 | 1664 | 100 | Plus |
CG4676-PA | 284 | CG4676-PA | 2..275 | 1..283 | 446 | 35.2 | Plus |
CG10344-PB | 278 | CG10344-PB | 1..268 | 1..279 | 382 | 28.9 | Plus |
CG10344-PA | 198 | CG10344-PA | 1..166 | 1..172 | 341 | 36.6 | Plus |
CG13029-PC | 288 | CG13029-PC | 30..276 | 22..278 | 337 | 31.6 | Plus |