Clone BO25589 Report

Search the DGRC for BO25589

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptCG30100-RA
Protein status:BO25589.pep: Imported from assembly
Sequenced Size:472

Clone Sequence Records

BO25589.complete Sequence

472 bp assembled on 2010-06-28

GenBank Submission: KX796759

> BO25589.complete
GAAGTTATCAGTCGACATGCTGCGAGGTCTGGTGCGATTCCTGGCGCTGC
CTCCGACCGCTGTGCGCTGCAAGTCGAATCTGGACTACTCCCGCTTTCCC
GTGCTTCAGGAGTCCGATATCGAGGAGACCTTCATGCGGGGCAGTGGTCC
TGGTGGCCAGGCTGTCAACAAGACATCCAACTGCGTGTTCTTGCGCCATC
TACCCACCAATATAACGGTCAAGTGTCACACACATCGTCTAGCATCAAAG
AATCGAGTGGAGGCTCGTAAACTTCTACTGGAAAAACTGGACGTGCATCT
AAACGGGGAGCATTCAATTGCCGCGCAAGTCAAGGCACAAGAGCAGAGAA
AGTCCACTGAGCGGCGGCGGCGACAGGAAAAGCTGCAAGAAATGAAGAAA
AGCTGGCAGGATAGAGAGCGCACAGATGGGGGAACCAAATCTACCGATAA
AGAGGCAAGCTTTCTAGACCAT

BO25589.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG30100-RB 441 CG30100-PB 1..438 17..454 2130 99.1 Plus
CG30100-RA 441 CG30100-PA 1..438 17..454 2130 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG42372-RA 762 CG42372-RA 308..745 17..454 2130 99.1 Plus
CG42372-RC 697 CG42372-RC 243..680 17..454 2130 99.1 Plus
CG30100-RB 697 CG30100-RB 243..680 17..454 2130 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16291815..16292252 17..454 2130 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 08:50:08 has no hits.

BO25589.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:09:33 Download gff for BO25589.complete
Subject Subject Range Query Range Percent Splice Strand
CG42372-RA 308..745 17..456 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:36 Download gff for BO25589.complete
Subject Subject Range Query Range Percent Splice Strand
CG42372-RA 308..745 17..456 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:51 Download gff for BO25589.complete
Subject Subject Range Query Range Percent Splice Strand
CG30100-RB 243..680 17..456 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:51 Download gff for BO25589.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16291815..16292252 17..456 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:36 Download gff for BO25589.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12179320..12179757 17..456 98   Plus

BO25589.pep Sequence

Translation from 16 to 472

> BO25589.pep
MLRGLVRFLALPPTAVRCKSNLDYSRFPVLQESDIEETFMRGSGPGGQAV
NKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHS
IAAQVKAQEQRKSTERRRRQEKLQEMKKSWQDRERTDGGTKSTDKEASFL
DH

BO25589.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG30100-PB 146 CG30100-PB 1..146 1..146 754 100 Plus
CG30100-PA 146 CG30100-PA 1..146 1..146 754 100 Plus