BO25618.complete Sequence
1255 bp assembled on 2010-06-28
GenBank Submission: KX794627
> BO25618.complete
GAAGTTATCAGTCGACATGTTAATTCAACTGGTCTTCCTGGGCATCCTAT
TGTGGGCGTCCTTCTTTTGGCTGCAGTGCCGCTACCTGGATGTCCTGGAA
CTCCTCTTCGCCTGGATAGGCAATCAGTTGGCGGAAACTCGCAGGAGGCG
AGCTCGCGAAGAACGGTGCCGCCTGGGCAAAAAGTGGGCGGTCGGAAATA
AGGGCGATGGCATGGAGAAGCTGCTCTCGCCGCCGATCAAGAATCGTCTC
AATATCCGAGTGGAGCAGTGCTGCGACTTCATAACCGCCGGCTTGGGCTT
GGTGCTCGAGGACGACGTGACCCAGAGGTTTGTGGCCCCACCTTCGCCAG
CTGGGGAATGGAATCTGCTGACCCGCAACCTTCGTCAGAGGAATCGATAC
CTCAGCTGGCGTTTAAGGACGGTCTGGCTGCTGGGCTGGGTTGTACGCTA
CGGACTGCTTTTGCCCTTCAGGACCATTGGCTGCTGGCTGTGCCTGTTCA
TGATCAGTGGAGTCTCAATGCTGCTGGGTCACATTCCCGACTGGTGCTTC
AAGAAAAAGTTGGTGGAGCTGGTATTGCGGCAGTGCTTCCGAATCACGGC
CGCCTGCCTGCCGATGATCCGCAGATTCCACAACACGGAGTATCGGCCCA
CCAAGGGCATCTGTGTGTGCAATCACACGAGCCCCTTAGACGTCCTGGTG
CTGATGTGCGATGCCAACTACTCGCTGACGGGCCAGGTTCACACCGGCAT
CCTGGGCGTCCTGCAGCGCGCCCTGTCGAGGGTCTCCCACCACATGTGGT
TCGACCGCAAGGAACTGGCCGATCGTGAGGCTCTGGGTCTGGTGCTCCGC
CTACACTGCTCCATGAAGGATCGGCCGCCGGTCCTGCTCTTCCCCGAGGG
CACTTGCATCAACAACACCGCCGTAATGCAGTTCAAAAAGGGTAGCTTCG
CGGTCAGCGACGTCGTTCATCCAGTGGCCATTCGATACGATCGCCGATTC
GGCGAGGCCTATTGGGACAGCACCCGTTACTCTATGCTCAGATACATGCT
GATGGTGGTCAGCTCGTGGTGCATTTGCTGCGATGTTTGGTACATGCCGG
CACTCAGCCGGTGCAACGACGAGTCCCCAGTAGAGTTTTCGAATCGAGTG
AAGGCCGCAATCGCCGCCCAGGCGAATATCGATGATCTGCCCTGGGACGG
AAACCTAAAACGCTGGAGTCCCGTCAGGGACTGGCAAGCAAGCTTTCTAG
ACCAT
BO25618.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-RA | 1224 | CG15450-PA | 1..1221 | 17..1237 | 6105 | 100 | Plus |
| CG3209-RC | 1380 | CG3209-PC | 970..1113 | 878..1021 | 240 | 77.8 | Plus |
| CG3209-RE | 1143 | CG3209-PE | 733..876 | 878..1021 | 240 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-RA | 1490 | CG15450-RA | 140..1361 | 16..1237 | 6110 | 100 | Plus |
| CG3209-RC | 1751 | CG3209-RC | 1120..1263 | 878..1021 | 240 | 77.8 | Plus |
| CG3209-RE | 1807 | CG3209-RE | 1176..1319 | 878..1021 | 240 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20824291..20825512 | 16..1237 | 6110 | 100 | Plus |
| 2R | 25286936 | 2R | 24072855..24072959 | 878..982 | 210 | 80 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:51:35 has no hits.
BO25618.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:04 Download gff for
BO25618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 146..1361 | 22..1239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:09 Download gff for
BO25618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 146..1361 | 22..1239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:18 Download gff for
BO25618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 146..1361 | 22..1239 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:18 Download gff for
BO25618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20824297..20825512 | 22..1239 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:09 Download gff for
BO25618.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20695324..20696539 | 22..1239 | 99 | | Plus |
BO25618.pep Sequence
Translation from 16 to 1255
> BO25618.pep
MLIQLVFLGILLWASFFWLQCRYLDVLELLFAWIGNQLAETRRRRAREER
CRLGKKWAVGNKGDGMEKLLSPPIKNRLNIRVEQCCDFITAGLGLVLEDD
VTQRFVAPPSPAGEWNLLTRNLRQRNRYLSWRLRTVWLLGWVVRYGLLLP
FRTIGCWLCLFMISGVSMLLGHIPDWCFKKKLVELVLRQCFRITAACLPM
IRRFHNTEYRPTKGICVCNHTSPLDVLVLMCDANYSLTGQVHTGILGVLQ
RALSRVSHHMWFDRKELADREALGLVLRLHCSMKDRPPVLLFPEGTCINN
TAVMQFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYSMLRYMLMVVSS
WCICCDVWYMPALSRCNDESPVEFSNRVKAAIAAQANIDDLPWDGNLKRW
SPVRDWQASFLDH
BO25618.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:14:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-PA | 407 | CG15450-PA | 1..407 | 1..407 | 2215 | 100 | Plus |
| CG3209-PB | 458 | CG3209-PB | 113..442 | 75..407 | 909 | 47.7 | Plus |
| CG3209-PC | 459 | CG3209-PC | 113..443 | 75..407 | 848 | 45.8 | Plus |
| CG3209-PD | 537 | CG3209-PD | 284..521 | 170..407 | 739 | 54.2 | Plus |
| CG3209-PE | 380 | CG3209-PE | 185..364 | 223..407 | 548 | 54.1 | Plus |
| CG3209-PD | 537 | CG3209-PD | 113..273 | 75..237 | 302 | 35.4 | Plus |
