BO25621.complete Sequence
1663 bp assembled on 2010-06-28
GenBank Submission: KX795431
> BO25621.complete
GAAGTTATCAGTCGACATGATCGAAAATTCGTTTAAAATGGAAATGCACT
TTAAAAACCGTTGGCAAGCGGCCAGCTTATTTTTGCGCTATCCTCGCACG
GTCACACTGTGCTTGAGCGGTAAAAGTGGCGATATGGACGAATCGGTCAA
TTTAAGCACCAGCATGGGCGATGTGGAGGCATCCATGCTGAATCACAACG
TGAGCTTCAGCAGCACCATGGTCACGTCCAATGGCGATCTTTCGTTGCCC
AAACTGAGCGTGACTCTTTCGGCGGAGGAGATCCTAAAGCTGCGTTCCGG
GCGTCCAAAGAACGCCGTTGAATCGCCGCATGCGGGTGTGCCCATGGAGA
CAAGCCTGGCTGCCGAGGAGGAAGCGAATGGGGATGAGGAAGAGGAAAGC
GTGCGGGTCGTCGACATAGAGGACACTTTGGAGCTGACGTCGAATGGCAA
TGAGGCGAAGCCGGAAGACCAGGAGCTTGCGATTGCTCCCGTCCTCCAGT
ACTTCCAGGGAGCACTTGTTGAGTTGGGCCGACGCTGCTGGACCTCGTCC
ACGGAGGCTCAGCACTACACCAAAGGCTGCTACTGGTCCCCGGACGGCAC
GTGCCTTCTGGTGCCCGTTCACCTAGATGGCATGCACGTTATAGAGATGC
CCAGTGACCTCTACTCCGCAGATACGGTGCAGCCGGCACGCTCGCTGACC
AAGCTCCAGTCGGAGGTGCACGTGCCCGAGGGCGGAACCGTCTACGACTG
CGTCTGGTATCCGCACATGAACAGCCTGCAACCAGAAACCTGCTTGTGGC
TGGCCACGCGGCAGCACGAACCCATACACATGTGGGATGCCTTCGACGGT
TCCCTGCGATGCAGCTACAGTGGGTACGATGCCGTAGACGAAGTAATGGC
GGCCATTTCCTTGGCCTTCTCCCATGACGGCGAGCAGATCTATGCGGGAT
ACAAGCGCTGCATCAAGATCTTCGACACCAGCAGACCCGGACGTTTTTGC
GACGATTACCCTGTCAAGTTTGCCATATCCTGCATTGCACAGACCACTGC
GCACCCGCACACTCTAACCTGCGGCAACTGGCATGGCTACATCCAGCACT
TTGACTTGCGGTGTAGCCACAAGCAGGGTCCTCTCTTCACGCTGGGAGGG
CACAAGGGCGGCATCACACAACTGCGCTATGGAGAGTTTGGCAACGGGGA
GTGGCATCTGTTCAGTGGAGCTCGCAAGTGCGATAAGATCTTGCAGTGGG
ACATGCGCAACTACAAGCAGCCACTGGTGGAGTTGCAGCGCCATGTGGAC
ACCAATCAGCGTATTCAATTCGACCTCGCATCCGACAGCAATTGGCTGGC
TAGCGGTGACACACGGGGATTCGTCAATGTTTGGGATCTCAAAAAATACG
GAGATCCTTCCGTACTGCCCCTGCATTCAGACTGCTGCAACGGAGTGGCA
CTCAATCCGGCTATGCCGATTCTAGCCACCAGCTCGGGGCAGTTCCACTT
TACAGACCAAAGTGCCCAAGGGGACAACGTGACCTTAAACGGAACGGAAA
CGACGGAGTTGCCGGCGCCGGCCGATGTGAATCAAAATCAGAAGGAAGTT
CTCTACGAGAACGCAGTGGTCATGTGGTGGTGCGGCCAAACGGGAGCAAG
CTTTCTAGACCAT
BO25621.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| WDR79-RC | 1632 | CG9226-PC | 1..1629 | 17..1645 | 8115 | 99.9 | Plus |
| WDR79-RB | 1515 | CG9226-PB | 1..1512 | 134..1645 | 7530 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| WDR79-RC | 1724 | CG9226-RC | 40..1668 | 17..1645 | 8115 | 99.9 | Plus |
| WDR79-RB | 1602 | CG9226-RB | 1..1546 | 100..1645 | 7700 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6125935..6126597 | 1645..983 | 3315 | 100 | Minus |
| 2L | 23513712 | 2L | 6126899..6127553 | 798..144 | 3245 | 99.7 | Minus |
| 2L | 23513712 | 2L | 6126655..6126843 | 984..796 | 945 | 100 | Minus |
| 2L | 23513712 | 2L | 6127610..6127736 | 143..17 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:51:25 has no hits.
BO25621.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:02 Download gff for
BO25621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9226-RA | 27..1655 | 17..1647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:06 Download gff for
BO25621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| WDR79-RB | 1..1546 | 100..1647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:14 Download gff for
BO25621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| WDR79-RC | 40..1668 | 17..1647 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:14 Download gff for
BO25621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6125931..6126595 | 985..1647 | 99 | <- | Minus |
| 2L | 6126655..6126843 | 796..984 | 100 | <- | Minus |
| 2L | 6126902..6127553 | 144..795 | 99 | <- | Minus |
| 2L | 6127610..6127736 | 17..143 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:06 Download gff for
BO25621.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6125931..6126595 | 985..1647 | 99 | <- | Minus |
| arm_2L | 6126655..6126843 | 796..984 | 100 | <- | Minus |
| arm_2L | 6126902..6127553 | 144..795 | 99 | <- | Minus |
| arm_2L | 6127610..6127736 | 17..143 | 100 | | Minus |
BO25621.pep Sequence
Translation from 16 to 1663
> BO25621.pep
MIENSFKMEMHFKNRWQAASLFLRYPRTVTLCLSGKSGDMDESVNLSTSM
GDVEASMLNHNVSFSSTMVTSNGDLSLPKLSVTLSAEEILKLRSGRPKNA
VESPHAGVPMETSLAAEEEANGDEEEESVRVVDIEDTLELTSNGNEAKPE
DQELAIAPVLQYFQGALVELGRRCWTSSTEAQHYTKGCYWSPDGTCLLVP
VHLDGMHVIEMPSDLYSADTVQPARSLTKLQSEVHVPEGGTVYDCVWYPH
MNSLQPETCLWLATRQHEPIHMWDAFDGSLRCSYSGYDAVDEVMAAISLA
FSHDGEQIYAGYKRCIKIFDTSRPGRFCDDYPVKFAISCIAQTTAHPHTL
TCGNWHGYIQHFDLRCSHKQGPLFTLGGHKGGITQLRYGEFGNGEWHLFS
GARKCDKILQWDMRNYKQPLVELQRHVDTNQRIQFDLASDSNWLASGDTR
GFVNVWDLKKYGDPSVLPLHSDCCNGVALNPAMPILATSSGQFHFTDQSA
QGDNVTLNGTETTELPAPADVNQNQKEVLYENAVVMWWCGQTGASFLDH
BO25621.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| WDR79-PC | 543 | CG9226-PC | 1..543 | 1..543 | 2940 | 100 | Plus |
| WDR79-PB | 504 | CG9226-PB | 1..504 | 40..543 | 2732 | 100 | Plus |
