BO25623.complete Sequence
1567 bp assembled on 2010-06-28
GenBank Submission: KX795684
> BO25623.complete
GAAGTTATCAGTCGACATGACGATGAATCGCCACGAGCGTATCGAGTGCA
AAGGATGCGGAAAGCGGTCCCTCACCTTCAGGTGCTATCGCTGCCTGAGC
TGCCAGGACTTTGATATTTGCGAGGAGTGCTATGACAATGACTTCACCAC
ATCCACGCATCCGTTTGACCATCCGGTGGTATGTGTCCTCATTCCGGCAG
ATGTGGAACTGTACTTTGGTGGCGAGTACATCAGTAACTATCCGCCGCAG
AGCTACCGCTGTCCGTACTGCAAGAGATGGGGCTTCAACGAGTCCACCTT
CCTGGAGCATGTATCGGCAATGCATCCGGATGCCAGTCCCCTGCTGGTCT
CCACCATGGTCGGTCTCTTCGAGCAGCAGCAGGCGGCACGTCTCTTTCTG
GAGAATGAGCAGTTGGCCTCCATTGCCGTGGCCGCCACATCGCGCAACGA
ACTGATGCGTCGCCCAGAGGGCTCCATGGCCCTCTACTTGGAGCCGCTAA
ATCGGGATGGAAGCTATCGCAGGGTGGTGGAACGGAATAACGAAGATCGT
TCGCGGCGCTTGTCTCCGGATGGCCGTGATCGGCTTCAGGCTCTGGTCAG
AGAGCGGTACTCCCGTATTGCACGCCGAAGTGCTGCCAGAGTTGGTAACA
TGACTTCCAGACCGCTGCTAGCGCCTGCTCCCGGTGACGGCTCCCGCTTG
AGTGGGATACAGGAGAGCATAGAGGCAGGCCAGGGAATACGTAATGTCAT
TGTGGAAGAGCTAAGCACCTCCAACTACGATCCTCCATTCACCATCAATG
CCAGTGCCAGTGCCATATTGGAGCAACAGCAGCAGCAGCAGGTGATGGGA
CCAAGCCCAAATGCCGCCGCTCCACCTATCGTAACACACCCATCGCTGAT
CGAGATGATGCGCTTCTATGACGAGGCTGGCTTGCAGCCATTTCCAGCTT
CATCCCGTCGAGTCATCCGCACCAGGCACGCAAACCCAGCTCAACCGGCG
GCCAACATCGGTAACAATACACGGAGCATAAATGTTTACGGACCCACATC
CGCTTTTACCCAGGCGTCGCACAATACTCGATCCTTGACCGCCCCCGATC
TGTTTTCGCTTGACGAGCGGTATCGTATTAGCAGGATGCCCATGTTCCAG
GCAAATCCCGGAGCACTACATCGCCAGGGAACCGGGACGCGCGCTTTGGA
TACGCGCGCCGTGGAATTCAGTGAATTTCCGCCGGAAGAAACCGAACTGC
CCCTCATCCTGGGCACTTCCACGATCGAGGACCCGTCGAAGCTGACCAAG
CAGAGGGATCAGGAGCGCAGGCGTTTTCTCTGCTATCGCTTCACAACACC
CAGGTCATCTAAGCGTCCCCAGAATCATTTTCTATTGCAACGCGCCGAAT
TTGTTTCCCAGGTGCTTTACTCCGCCTTGTGCGATGAAGATTTCCAGGAT
ATTTCCTTTCCGATCTTGAGAAACATTCCAAAACTGAGGACCATTCCGGA
CAACGTCATCTCCGGTGCCGGCGATGCTGAAAAGAATCCATCTAATCCGG
CAAGCTTTCTAGACCAT
BO25623.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15286-RB | 1536 | CG15286-PB | 1..1533 | 17..1549 | 7665 | 100 | Plus |
| CG15286-RA | 1536 | CG15286-PA | 1..1533 | 17..1549 | 7665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15286-RB | 1814 | CG15286-RB | 162..1694 | 17..1549 | 7665 | 100 | Plus |
| CG15286-RA | 1841 | CG15286-RA | 162..1694 | 17..1549 | 7665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14338401..14339933 | 17..1549 | 7665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:51:40 has no hits.
BO25623.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:05 Download gff for
BO25623.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15286-RA | 162..1694 | 17..1551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:11 Download gff for
BO25623.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15286-RA | 162..1694 | 17..1551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:21 Download gff for
BO25623.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15286-RA | 162..1694 | 17..1551 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:21 Download gff for
BO25623.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14338401..14339933 | 17..1551 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:11 Download gff for
BO25623.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14338401..14339933 | 17..1551 | 99 | | Plus |
BO25623.pep Sequence
Translation from 16 to 1567
> BO25623.pep
MTMNRHERIECKGCGKRSLTFRCYRCLSCQDFDICEECYDNDFTTSTHPF
DHPVVCVLIPADVELYFGGEYISNYPPQSYRCPYCKRWGFNESTFLEHVS
AMHPDASPLLVSTMVGLFEQQQAARLFLENEQLASIAVAATSRNELMRRP
EGSMALYLEPLNRDGSYRRVVERNNEDRSRRLSPDGRDRLQALVRERYSR
IARRSAARVGNMTSRPLLAPAPGDGSRLSGIQESIEAGQGIRNVIVEELS
TSNYDPPFTINASASAILEQQQQQQVMGPSPNAAAPPIVTHPSLIEMMRF
YDEAGLQPFPASSRRVIRTRHANPAQPAANIGNNTRSINVYGPTSAFTQA
SHNTRSLTAPDLFSLDERYRISRMPMFQANPGALHRQGTGTRALDTRAVE
FSEFPPEETELPLILGTSTIEDPSKLTKQRDQERRRFLCYRFTTPRSSKR
PQNHFLLQRAEFVSQVLYSALCDEDFQDISFPILRNIPKLRTIPDNVISG
AGDAEKNPSNPASFLDH
BO25623.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:14:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15286-PB | 511 | CG15286-PB | 1..511 | 1..511 | 2676 | 100 | Plus |
| CG15286-PA | 511 | CG15286-PA | 1..511 | 1..511 | 2676 | 100 | Plus |
| CG11984-PI | 599 | CG11984-PI | 1..324 | 3..283 | 339 | 27.8 | Plus |
| CG11984-PH | 599 | CG11984-PH | 1..324 | 3..283 | 339 | 27.8 | Plus |
| CG11984-PG | 599 | CG11984-PG | 1..324 | 3..283 | 339 | 27.8 | Plus |
