BO25625.complete Sequence
1693 bp assembled on 2010-06-28
GenBank Submission: KX800151
> BO25625.complete
GAAGTTATCAGTCGACATGGGGCACATCGATGGCACAAATAAACTGAAAG
GCTTCGCTCGTCCCGCATTCACCAGCGAACTGGCCTTCAATAGCGTGGTG
CCATGGAGCAATGAGATCCATCGACGCCACGGTGAGGCCATCCATCCGTG
CAACGATGCGATGGACTTCCATGCGTCGGTGTTTAGAAGTCTGGGTGCCG
TGACGCGTGTGTGCATTGGCACATCAACATTTTGGTGTACTTCGTCACTT
TTGCAATTTCATAGCAACTATTTTGATCGCAACATTTGTCCGGTGAATTG
CTTTCGCGAGGGCACCGACCTTATTGCCGTGGGCTTTCGAGCTGCCTACA
CTTGGATGAGACTGCAGGAGCCACTGGATCCATTCATGCAACCAGATAAA
CTAATGACGCTCCTGCACACAGCCGTCCAGCTGGAGATGCCGGCACTGAA
AGCATTGTGCTATGAACAACTGTGCACCGATCGCTTTCGCGAGGAGACCG
CCTTTCAGGTTTACTTGAGGGCTTTGAAATATCCGCAACTCGAGGAGCTG
CGCAAACTGATGCTGCAAAGGATCGGTGCTGCTTTTCTGGCCGTGCTGGG
TGGTGATGATTTTCAGCGAATGCCTCTCGAGGATGTGATTACCATGCTGC
AGCAGGACTCATTGGGTGTCAATTCGGAAATGGAGGTGCTTGTGGCCATT
ATAAGATGGCTGAATTGTCAATCGAAATGCATTGACCAGGCGACGCCACT
ATTGATGGACTGCCTTCGGCTGACACTCTTACCACTGCCAATTTTGAAAA
GATTTTGGCGCTGTGCCATGGCACCACCGGTGCCCGACGAGCCCTTTATG
AACGCTGTTCGTGGCAATATTCACATTCGTGAGAGGATCAGCTGTGCAAT
TACTGTGGTCCAAATGCACCATTTGCATACAAGTCGTCGTGAGTTTCTCG
ACTTCTGTCGCTCCAAGGGCTTGCTGGTCGATATGCCCAGGGAGTGGATA
TACGATGAGCAGTGCCATTATCATTTGCCGCGACCTGGTGGTCCCTACTC
TCATCTTATCTGTGTTCATGTCATTTCGAATTATGCGATACAAAGGGCTC
AGCGTCTAATGGAATCCTCAAAGCGTTGGCCCAGACGTGTTAATACATAC
ATGCCGCCGTCCGATGATCTACAGACCATCAATGAGCTGCCCGAGGACAA
GGATGAGGAGGCGCAGGTGTCAGTAGAGCCATCAGCGCCAGAAATGTCCG
AAGGTCTACCGCAGCCCGAAGAGGATGATTGTTTCATTGCTCGCCTCTTT
CGTGGCACACTATTGCGACTGAACGAAGTGATGGCCGCGCAGGACAGAAA
TATTGAGCGACGCATTGACAATCTTATACGTGATGGTACATTAAGGCCCA
GGTTTATACCCAACGCTATGTCGAGATTTGTATTGCCAACAGCAATGACT
TGTGCTGCACAGGAAGATCTTCAAGAAGATCTCTTTCTCCAAACCGATTT
CTATTCGAGCAACCTGGACGCCATCGATGCGTATTTTTTTCTTCATGTCT
GTCGAATGAGGCAGTTGGTCCAGCCGAAAGTTGTAGTTCCTATCGAGAAA
TCGTCCGAGGAGAGTGTGCGTCCCATGGAGAGCTATGTGCTCGAAACCGA
CCAAATGATCAAAGTCCTAGGCTTTGCAAGCTTTCTAGACCAT
BO25625.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12692-RC | 1662 | CG12692-PC | 1..1659 | 17..1675 | 8295 | 100 | Plus |
| CG12692-RB | 1662 | CG12692-PB | 1..1659 | 17..1675 | 8295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12692-RC | 1946 | CG12692-RC | 88..1746 | 17..1675 | 8295 | 100 | Plus |
| CG12692-RB | 1911 | CG12692-RB | 88..1746 | 17..1675 | 8295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4300317..4301700 | 1675..292 | 6920 | 100 | Minus |
| X | 23542271 | X | 4301795..4302076 | 298..17 | 1395 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:51:19 has no hits.
BO25625.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:01 Download gff for
BO25625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12692-RB | 88..1746 | 17..1677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:04 Download gff for
BO25625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12692-RB | 88..1746 | 17..1677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:11 Download gff for
BO25625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12692-RB | 88..1746 | 17..1677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:11 Download gff for
BO25625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4300315..4301699 | 293..1677 | 99 | <- | Minus |
| X | 4301801..4302076 | 17..292 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:04 Download gff for
BO25625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4194348..4195732 | 293..1677 | 99 | <- | Minus |
| arm_X | 4195834..4196109 | 17..292 | 100 | | Minus |
BO25625.pep Sequence
Translation from 16 to 1693
> BO25625.pep
MGHIDGTNKLKGFARPAFTSELAFNSVVPWSNEIHRRHGEAIHPCNDAMD
FHASVFRSLGAVTRVCIGTSTFWCTSSLLQFHSNYFDRNICPVNCFREGT
DLIAVGFRAAYTWMRLQEPLDPFMQPDKLMTLLHTAVQLEMPALKALCYE
QLCTDRFREETAFQVYLRALKYPQLEELRKLMLQRIGAAFLAVLGGDDFQ
RMPLEDVITMLQQDSLGVNSEMEVLVAIIRWLNCQSKCIDQATPLLMDCL
RLTLLPLPILKRFWRCAMAPPVPDEPFMNAVRGNIHIRERISCAITVVQM
HHLHTSRREFLDFCRSKGLLVDMPREWIYDEQCHYHLPRPGGPYSHLICV
HVISNYAIQRAQRLMESSKRWPRRVNTYMPPSDDLQTINELPEDKDEEAQ
VSVEPSAPEMSEGLPQPEEDDCFIARLFRGTLLRLNEVMAAQDRNIERRI
DNLIRDGTLRPRFIPNAMSRFVLPTAMTCAAQEDLQEDLFLQTDFYSSNL
DAIDAYFFLHVCRMRQLVQPKVVVPIEKSSEESVRPMESYVLETDQMIKV
LGFASFLDH
BO25625.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12692-PC | 553 | CG12692-PC | 1..553 | 1..553 | 2932 | 100 | Plus |
| CG12692-PB | 553 | CG12692-PB | 1..553 | 1..553 | 2932 | 100 | Plus |
| CG9970-PA | 484 | CG9970-PA | 146..434 | 60..346 | 325 | 32.4 | Plus |
| CG30357-PA | 451 | CG30357-PA | 173..393 | 107..336 | 212 | 28.8 | Plus |
| CG12857-PA | 440 | CG12857-PA | 95..381 | 44..336 | 206 | 24.7 | Plus |
