BO25701.complete Sequence
613 bp assembled on 2010-06-29
GenBank Submission: KX799987
> BO25701.complete
GAAGTTATCAGTCGACATGATGCACACACCCCGCCTGTCGAATATTAAGC
GGGCATCGGTGCTCCTCGTCACCGCCCTGCTCCTCTATGTCTTCGTTTTC
TCCAGTGGCTATCAGAAGTACCAGATCGAGGGCATTATCAAGCAGAGTCA
ACCGGAAAAGGTCTGGGAGTATGTGGCGGATTTTAATAAGATGCGTCTGC
TCAATCCCACCATTTTAAACTTCAAGATCCTAGCTGATCATGGCCACGCC
CACGACTGGCGTTACACGGTGCAATACACAGAGAGATTATCCCATTGGCC
ATACTGGCTGAATACGGCCACGGCCAAGTACGTGGTCACCAAGTCATTGC
CCGGAGTATCGCCCGTGGCCTATGCCATTAAGTCCACGCATCAGACTTGC
TTCTTTGCCGGATTCTATTGCCTACAATCACTGAGTGAATTCACGTTCAG
AAACTCCAATGGTGATACCTTTGCCCAGGAGAACATCCAGTATCAGTGTC
CACCACTCTTGGGCGGCATGTGTAGGCGGGAACTGGAGTTCCAGCGCCAG
GCGGTGATGCACAACTTAACGATAATATTCGGAAAACAGAGAGGAGCAAG
CTTTCTAGACCAT
BO25701.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6310-RA | 582 | CG6310-PA | 1..579 | 17..595 | 2820 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6310-RA | 690 | CG6310-RA | 20..599 | 16..595 | 2825 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11069648..11069845 | 213..16 | 990 | 100 | Minus |
| 3L | 28110227 | 3L | 11069368..11069576 | 422..214 | 970 | 97.6 | Minus |
| 3L | 28110227 | 3L | 11069134..11069306 | 595..423 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:54 has no hits.
BO25701.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:39 Download gff for
BO25701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6310-RA | 10..588 | 17..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:34 Download gff for
BO25701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6310-RA | 21..599 | 17..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:00 Download gff for
BO25701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6310-RA | 21..599 | 17..597 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:00 Download gff for
BO25701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11069130..11069306 | 423..597 | 98 | <- | Minus |
| 3L | 11069368..11069576 | 214..422 | 97 | <- | Minus |
| 3L | 11069648..11069844 | 17..213 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:34 Download gff for
BO25701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11062230..11062406 | 423..597 | 98 | <- | Minus |
| arm_3L | 11062468..11062676 | 214..422 | 97 | <- | Minus |
| arm_3L | 11062748..11062944 | 17..213 | 100 | | Minus |
BO25701.pep Sequence
Translation from 16 to 613
> BO25701.pep
MMHTPRLSNIKRASVLLVTALLLYVFVFSSGYQKYQIEGIIKQSQPEKVW
EYVADFNKMRLLNPTILNFKILADHGHAHDWRYTVQYTERLSHWPYWLNT
ATAKYVVTKSLPGVSPVAYAIKSTHQTCFFAGFYCLQSLSEFTFRNSNGD
TFAQENIQYQCPPLLGGMCRRELEFQRQAVMHNLTIIFGKQRGASFLDH
BO25701.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6310-PA | 193 | CG6310-PA | 1..193 | 1..193 | 1034 | 100 | Plus |
