BO25706.complete Sequence
1015 bp assembled on 2010-06-29
GenBank Submission: KX793936
> BO25706.complete
GAAGTTATCAGTCGACATGGGGAATGGCATGAACAAGGTCTTGCCGGGAC
TTTATGTGGGCAACTATCGCGACTCCAAGGATCACGCTCAGCTGGAAAGA
TTCAAGATCTCGCACATCATCGCCATACATGACAGTCCGCGGCGTTTGCT
GCCGGACAAGCACTACCTGTGCGTGATGGCCTCGGATACGCCAGACCAGA
ATCTCTCCCAATACTTTTCCGTCTGCAACGACTTCATACACGCCGCCCGG
CTTCGCGAAGGCAACGTACTCATCCACTGCCTGGCGGGGATGTCGCGCTC
GGTGACCGTGGCCGTGGCCTATATCATGACGGCCACACACCTGAACTGGA
AGGAGGCACTTAAGGTGGTTCGAGCTGGTCGCGCTGTAGCCAATCCAAAT
GCTGGATTCCAGAGCCAACTGCAGGAGTTTGAGCAGTTTAAGCTGTCCGA
GGAACGCCGCCGCTTGAGGGAACGCTTCCCATCCTCGGCTCTGGAGCAAC
TGGATCGCACTAAGGTGGCCACCGCGCTGGACAACTACCAGGAGTTGCTG
CAGAACCGCGACATCTGCGAGGGTAACTGCTCCCGCGGCGAAAAATGTCC
TACAGGTGCGGACCAAGACGTAGATGGTGTTAATATTGGTCAGGGGGAGG
AAGAAGACGAGGGTGAAGGCGAGGGCTTGGGCAAAGTCAGGCGAAGCTTG
GCTTACACTCTAAACTTTGCGGTGGACCAATGGAAGAGCAGTACCATTAA
AAAGGATCCGAACAATGACCCCCCACCGGATTTTAGCTTGGGCAAGGACC
TTATGCCAAGTGTGCGTTACTACGATCCGGAGTGCGACAAGGGTCAATTT
GTTAAGAATGTGGATTCGGACAATGATGAAGAACAGTATATTGCTTTCAA
GACCTCAACGAAGCTAGAAGCCAAGTCCACGTCAAAATTAAAAAAACGAC
GTGTACCAAAATCGGAATCCTGCAACCAAAGCTGTCTTGAGAAGCCAGCA
AGCTTTCTAGACCAT
BO25706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10089-RA | 984 | CG10089-PA | 1..981 | 17..997 | 4905 | 100 | Plus |
| CG10089-RB | 984 | CG10089-PB | 1..981 | 17..997 | 4905 | 100 | Plus |
| CG10089-RC | 984 | CG10089-PC | 19..981 | 35..997 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10089-RA | 1569 | CG10089-RA | 555..1537 | 15..997 | 4915 | 100 | Plus |
| CG10089-RB | 1518 | CG10089-RB | 504..1486 | 15..997 | 4915 | 100 | Plus |
| CG10089-RC | 1070 | CG10089-RC | 76..1038 | 35..997 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13468052..13468895 | 997..154 | 4220 | 100 | Minus |
| 3L | 28110227 | 3L | 13468952..13469072 | 155..35 | 605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:33 has no hits.
BO25706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:38 Download gff for
BO25706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RA | 313..1293 | 17..999 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:29 Download gff for
BO25706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RB | 262..1242 | 17..999 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:53 Download gff for
BO25706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RB | 506..1486 | 17..999 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:53 Download gff for
BO25706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13468050..13468894 | 155..999 | 99 | <- | Minus |
| 3L | 13468953..13469069 | 38..154 | 100 | <- | Minus |
| 3L | 13469777..13469797 | 17..37 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:29 Download gff for
BO25706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13461150..13461994 | 155..999 | 99 | <- | Minus |
| arm_3L | 13462053..13462169 | 38..154 | 100 | <- | Minus |
| arm_3L | 13462877..13462897 | 17..37 | 100 | | Minus |
BO25706.pep Sequence
Translation from 16 to 1015
> BO25706.pep
MGNGMNKVLPGLYVGNYRDSKDHAQLERFKISHIIAIHDSPRRLLPDKHY
LCVMASDTPDQNLSQYFSVCNDFIHAARLREGNVLIHCLAGMSRSVTVAV
AYIMTATHLNWKEALKVVRAGRAVANPNAGFQSQLQEFEQFKLSEERRRL
RERFPSSALEQLDRTKVATALDNYQELLQNRDICEGNCSRGEKCPTGADQ
DVDGVNIGQGEEEDEGEGEGLGKVRRSLAYTLNFAVDQWKSSTIKKDPNN
DPPPDFSLGKDLMPSVRYYDPECDKGQFVKNVDSDNDEEQYIAFKTSTKL
EAKSTSKLKKRRVPKSESCNQSCLEKPASFLDH
BO25706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10089-PA | 327 | CG10089-PA | 1..327 | 1..327 | 1722 | 100 | Plus |
| CG10089-PB | 327 | CG10089-PB | 1..327 | 1..327 | 1722 | 100 | Plus |
| CG10089-PC | 327 | CG10089-PC | 5..327 | 5..327 | 1693 | 99.7 | Plus |
| CG10089-PF | 447 | CG10089-PF | 1..197 | 1..197 | 1032 | 100 | Plus |
| CG10089-PD | 447 | CG10089-PD | 1..197 | 1..197 | 1032 | 100 | Plus |
