Clone BO25708 Report

Search the DGRC for BO25708

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG14006-RA
Protein status:BO25708.pep: Imported from assembly
Sequenced Size:1321

Clone Sequence Records

BO25708.complete Sequence

1321 bp assembled on 2010-06-29

GenBank Submission: KX795291

> BO25708.complete
GAAGTTATCAGTCGACATGTGGGCTCCTCTGCTCGCTTTCGTTATCCTTG
GGCTAAACTATGCAGCATCCTCGTTCGTGAACTGGGATAATGTATTTTAC
GAGCAGCAGGCGACGTATCTGCGTCCTGGTGAGCCCCACATCCAGGAAGG
ACAGACGCTGCTTAACATGCTGTACGTGAACAACCAGGTCCAGGTCTACT
GCCAGCCGCCAACAGCGTTCTCCATGTGGAATGTCTTCCAGAGCAACCGC
CTGCGCCTGCAGATAGCCGCTGGCGAAGATTACACTCAGTATAAAGGAGC
CACCGTGCGGGAAGTTCATCATGCGCATAGCCAGCTGGATGAGTGCCACG
AAGGAAAGCCCTTGGGGCATTCCGCAGCAGACGAGCCACGGATCGTTCCG
ATGGCCACGTATGAGCACTCCTGTTACGGCATCTACACATCCAAACCGTT
CGTCCTCACGCTTGAAGTGATCAGTTTCGACCTTGAGCGGGTAAGCCAGT
TCACCTTTGGCATCGTTTTATGGTTAAGCTGTCCGCTCCTGGCGGATTCG
CTGCTTTTCTTCTACTGCTCAGCTGCGGCCCTGGGCGCCCACCTGGCGGG
TTTGTTGGCGGTCGCAGCCACCCTAATGGCATCTGATGGCGAGCGGTACC
TGCGACTCGGAACGCTCAAGGTGAACTTCAAGCTGGTGCTAAACGAGCGG
CCCACCGTGATAACCTTGGCGCTGGTCAGTGGCGCCTGGTTGCTGAAGTC
CGCCTCCCAGCGCTGCAGCTTTTTGTGGCGGTGCACTCTGTTTCGCCGCC
TGCATCACCGCTTGCTGAAGGGCACCTCCTACTTGCTGATTCTCACTGCA
TCCGATCACAGGGGCTTTGGGATGACCTGCCTTATGCTGTTGATGCCCTG
GCCGGAACTTTTGACTGTAATACGCTGGCTCAAAACCCTATACGCTTGCT
ACAAAAGGGGCTCCGTTAAACCAATGGTCCAGGTGGAAATCGAGAATCAG
GACGTCCCTTATCAAGACTCATATCTTCGGATCGTGCGATCCGAATACGA
TAATCGTTCATCCGAAAGCAGTGGTTTTAGCAGGAGTTTTAGCCAAAACA
AACATAACATGGGCTTTTATCGCGAGCAGGAGGATCAGGATAATGCCTTA
ATCTATGAATCTAGACGACCTACCGAGCGGAACTGCTTCAACAGATGTCA
CCAGTGTACCCCGACTAGATCACCCCGTCCAGAACCCCATTTGACCTCCT
TATATCGCAATCTTCACTATTCAAACGCGAAAAGCAGCTCCACATTTATG
AGAGCAAGCTTTCTAGACCAT

BO25708.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14006-RB 1290 CG14006-PB 1..1287 17..1303 6435 100 Plus
CG14006-RA 1290 CG14006-PA 1..1287 17..1303 6435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14006-RB 2397 CG14006-RB 60..1346 17..1303 6435 100 Plus
CG14006-RA 1591 CG14006-RA 60..1346 17..1303 6435 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5727466..5728752 1303..17 6435 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:46:07 has no hits.

BO25708.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:37 Download gff for BO25708.complete
Subject Subject Range Query Range Percent Splice Strand
CG14006-RA 60..1346 17..1305 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:26 Download gff for BO25708.complete
Subject Subject Range Query Range Percent Splice Strand
CG14006-RA 60..1346 17..1305 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:43 Download gff for BO25708.complete
Subject Subject Range Query Range Percent Splice Strand
CG14006-RA 60..1346 17..1305 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:43 Download gff for BO25708.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5727464..5728752 17..1305 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:26 Download gff for BO25708.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5727464..5728752 17..1305 99   Minus

BO25708.pep Sequence

Translation from 16 to 1321

> BO25708.pep
MWAPLLAFVILGLNYAASSFVNWDNVFYEQQATYLRPGEPHIQEGQTLLN
MLYVNNQVQVYCQPPTAFSMWNVFQSNRLRLQIAAGEDYTQYKGATVREV
HHAHSQLDECHEGKPLGHSAADEPRIVPMATYEHSCYGIYTSKPFVLTLE
VISFDLERVSQFTFGIVLWLSCPLLADSLLFFYCSAAALGAHLAGLLAVA
ATLMASDGERYLRLGTLKVNFKLVLNERPTVITLALVSGAWLLKSASQRC
SFLWRCTLFRRLHHRLLKGTSYLLILTASDHRGFGMTCLMLLMPWPELLT
VIRWLKTLYACYKRGSVKPMVQVEIENQDVPYQDSYLRIVRSEYDNRSSE
SSGFSRSFSQNKHNMGFYREQEDQDNALIYESRRPTERNCFNRCHQCTPT
RSPRPEPHLTSLYRNLHYSNAKSSSTFMRASFLDH

BO25708.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14006-PB 429 CG14006-PB 1..429 1..429 2282 100 Plus
CG14006-PA 429 CG14006-PA 1..429 1..429 2282 100 Plus