BO25718.complete Sequence
1132 bp assembled on 2010-06-29
GenBank Submission: KX793759
> BO25718.complete
GAAGTTATCAGTCGACATGAACCGGCCGGAGCTGGACTACTACGCGGTGC
TGGATCAGCCCAGAGGCGCCACCAAGGAGCAGATTACTCTGGCCTACCGC
CGCCTGGCCATTCGTCTTTGCCCACATCGCGACAAGAAGGACGAGCAGGA
CTTTGTGCCGCTGGCCCAGGAGGGTCGTCTCACTCACCTCTCACCCATGG
GCGAGCCCAGGCAGTGGGCTTACGTCAACATGGCCTTCGATGTGCTGGGC
AACGATCTGTACCGGGCCATATACGATCGCTTTGGCGAGGCGGGTTTGTT
CGAGGGCGTCATGCTGCCGAACGGATACTTTCCGCCCTATCAGTACGACG
GCGACCACATGAAGGTCTACGAGCGGGTCTTCGGTAGCTACTCGCCGTAT
GCCAACGTGATCGATGCGATCTCCAATCCACCGAGCTTGTACGCTACGCG
CCAGCATGGCATTGGCGTGCGTTCCAAGGACGCCAGTACGGAGAGGATCA
TCGAGCTGTCGCTGGAGGAAGTACGCACTGGCTGCGTCAAGCTGATGAAC
GTGTGGCGCCAGGAGATCGTGGACGCCAAGGAGTCGCGGCTGGAGAAGCG
CAAGCACACCTTAAAGCTGAACATTGCCCCGGGAACCACGGCCGGAACTC
GCTTCTGCTTCAAGGAGGAGGGCGATCGCTATCCGGCCACCATTCCGGGT
GATATTATTTTCATTGCCGCCGACAAGCCGCATCCGGACTTTGAGAGGAG
AAACCAACACGACCTGGTCTACAGGCAGTCTATTGGCCTGTGCCAGGCCT
TCACCGGCTTCACGTTCTTCATTTGCACGCTGGACCGGCGCCAGTTGAAG
GTGGTCATTACGGACGTAGTGCAGCCGGGATACACCAAAGTGGTTCCCCT
CGAGGGACTCCCCAAGTGCCGCAATTTGGATGCAGTTACGGCCATCAAGG
AGGCCAACAAGAAGGTGGAGCAGTTCGGGGATCTCATTATAGAATTTGAT
TATATCTTTCCCAAGTATTTGACTCCACATATGAAGCATATCACTCGCGA
ATTCTTCCGCGAATTCCGCAAGCTCGAAATAGAATTGGAGGAGGAGGAGG
AACGTAACATGGTTGCAAGCTTTCTAGACCAT
BO25718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12020-RA | 1101 | CG12020-PA | 1..1098 | 17..1114 | 5415 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12020-RA | 1242 | CG12020-RA | 61..1158 | 17..1114 | 5415 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1797365..1798349 | 17..1001 | 4865 | 99.6 | Plus |
| 3L | 28110227 | 3L | 1798414..1798526 | 1002..1114 | 550 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:42:56 has no hits.
BO25718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:31 Download gff for
BO25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12020-RA | 61..1158 | 17..1116 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:52 Download gff for
BO25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12020-RA | 61..1158 | 17..1116 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:33 Download gff for
BO25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12020-RA | 61..1158 | 17..1116 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:33 Download gff for
BO25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1797365..1798349 | 17..1001 | 99 | -> | Plus |
| 3L | 1798414..1798526 | 1002..1116 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:52 Download gff for
BO25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1797365..1798349 | 17..1001 | 99 | -> | Plus |
| arm_3L | 1798414..1798526 | 1002..1116 | 97 | | Plus |
BO25718.pep Sequence
Translation from 16 to 1132
> BO25718.pep
MNRPELDYYAVLDQPRGATKEQITLAYRRLAIRLCPHRDKKDEQDFVPLA
QEGRLTHLSPMGEPRQWAYVNMAFDVLGNDLYRAIYDRFGEAGLFEGVML
PNGYFPPYQYDGDHMKVYERVFGSYSPYANVIDAISNPPSLYATRQHGIG
VRSKDASTERIIELSLEEVRTGCVKLMNVWRQEIVDAKESRLEKRKHTLK
LNIAPGTTAGTRFCFKEEGDRYPATIPGDIIFIAADKPHPDFERRNQHDL
VYRQSIGLCQAFTGFTFFICTLDRRQLKVVITDVVQPGYTKVVPLEGLPK
CRNLDAVTAIKEANKKVEQFGDLIIEFDYIFPKYLTPHMKHITREFFREF
RKLEIELEEEEERNMVASFLDH
BO25718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12020-PA | 366 | CG12020-PA | 1..366 | 1..366 | 1941 | 100 | Plus |
| CG5001-PC | 346 | CG5001-PC | 4..344 | 7..345 | 368 | 29.1 | Plus |
| CG5001-PD | 350 | CG5001-PD | 4..348 | 7..345 | 364 | 28.8 | Plus |
| CG5001-PA | 350 | CG5001-PA | 4..348 | 7..345 | 364 | 28.8 | Plus |
| CG5001-PB | 350 | CG5001-PB | 4..348 | 7..345 | 364 | 28.8 | Plus |
