Clone BO25731 Report

Search the DGRC for BO25731

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG14346-RA
Protein status:BO25731.pep: Imported from assembly
Sequenced Size:652

Clone Sequence Records

BO25731.complete Sequence

652 bp assembled on 2010-06-29

GenBank Submission: KX796635

> BO25731.complete
GAAGTTATCAGTCGACATGTTCCTGGACGACTTTGGAAATCCAAAGGAGG
TGACTCCCGAAACCCTGAGCACTTACACATACGATCTGCATGGCACCAAG
CTGCTGACATCGGCGGACACCGAGATTTACCTGCCGCCGATGTGGCATGG
CACGATTTACAGCACTGAAAAGCTGCTGGACACCTACAAGAGGCGGTTCA
ATCCGGATCCAACTCTGCTGACCTTCCACGCCATGCAGCCGTACGAACCC
GAGTTCATTTGCGTCCAACGGACTGTGATCGAGCTAACGCTCCTTCCGGC
TGGTCAGAGCCTCTACAGCGACAAGGACATCGTCGTGTTCCTGATCAAGC
AGCCCGCCGAGATGAAAAACTCGCTGGTCACAAAGGAACTGAGCACGCTG
CTGGACTTCTTTCCGCACAACCACCACTACCACTCGATAATCATGAACGA
GGGCATCGATGTAGTCTACGTGGACGACAAGATCTACAACAATATATCGC
CCACCAGTCACCAGTTCCACCGCCTGTACAATTTGCTTCGAAATATCCAG
CCGGACGACGTGCAGAGCCTCTCGGGTTCTCCATTGCCCGATGTGCTGCG
CAGTGCCTGCAGGAAGGCAGCCCACAAGACCAAGGCAAGCTTTCTAGACC
AT

BO25731.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:26:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14346-RD 621 CG14346-PD 1..618 17..634 3090 100 Plus
CG14346-RC 621 CG14346-PC 1..618 17..634 3090 100 Plus
CG14346-RA 621 CG14346-PA 1..618 17..634 3090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:26:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14346-RD 755 CG14346-RD 48..666 16..634 3095 100 Plus
CG14346-RC 953 CG14346-RC 246..864 16..634 3095 100 Plus
CG14346-RA 860 CG14346-RA 153..771 16..634 3095 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1368530..1368961 203..634 2160 100 Plus
2L 23513712 2L 1368365..1368479 88..202 575 100 Plus
2L 23513712 2L 1368241..1368313 16..88 365 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:26:26 has no hits.

BO25731.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:57 Download gff for BO25731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14346-RA 146..758 22..636 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:53 Download gff for BO25731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14346-RA 159..771 22..636 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:21 Download gff for BO25731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14346-RA 159..771 22..636 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:21 Download gff for BO25731.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1368247..1368313 22..88 100 -> Plus
2L 1368366..1368479 89..202 100 -> Plus
2L 1368530..1368961 203..636 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:53 Download gff for BO25731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1368247..1368313 22..88 100 -> Plus
arm_2L 1368366..1368479 89..202 100 -> Plus
arm_2L 1368530..1368961 203..636 99   Plus

BO25731.pep Sequence

Translation from 16 to 652

> BO25731.pep
MFLDDFGNPKEVTPETLSTYTYDLHGTKLLTSADTEIYLPPMWHGTIYST
EKLLDTYKRRFNPDPTLLTFHAMQPYEPEFICVQRTVIELTLLPAGQSLY
SDKDIVVFLIKQPAEMKNSLVTKELSTLLDFFPHNHHYHSIIMNEGIDVV
YVDDKIYNNISPTSHQFHRLYNLLRNIQPDDVQSLSGSPLPDVLRSACRK
AAHKTKASFLDH

BO25731.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14346-PD 206 CG14346-PD 1..206 1..206 1096 100 Plus
CG14346-PC 206 CG14346-PC 1..206 1..206 1096 100 Plus
CG14346-PA 206 CG14346-PA 1..206 1..206 1096 100 Plus