BO25738.complete Sequence
1015 bp assembled on 2010-06-29
> BO25738.complete
GAAGTTATCAGTCGACATGCCCCCACTTGAATTAAACATGAATTTGGCCC
TAAATAAGACTTTCCAGAAGCGTGGATGTCAAATTCTTGGCCTCAACAAG
TACGGTATACAGCAGTGGCTGAAGACAATCGACACGATCATATTCGATGG
AAACGGTGTCCTGTGGAGCCACGGCAAGGTCCTTGAAAATGCAGCCGAGA
CGTTTAACGCACTGCGTGCCATGGGAAAGAAGGCCTTTATTTGCACCAAT
AACTCAGTGACTTCGGTCGAGGGCATCTGCAAGTATGCCCAGGAAATGGG
TTTCTTGGTGGCCAAGAATGAGATCCTTTCCTCGGTCCAAACTTTAGCCA
AATTTATGAAGGAGAAAAAGTTTAAGAAAAAGTGCTACGTAGTGGGCGGC
CAGGGAATCGTCGACGAATTAAAGTTGGTAGGAATCGAGTCCCTGCCCTT
GGATCATTCCTCTCTGCAGGGCTTCTCTATGCCAGATCACATCCACAGTA
TCTACTTGGATCCCAATGTGGGTGCTGTGGTCGTGGGATCTGACAAGGAT
TTTAATACAATCAAGCTGACAAAGGCGTGTTGCTATCTCAGAGACAGCGA
GGTAATGTTTGTGGCCACAAGTCGCGATGCGGCACTTCCGGCGGCTCCAG
GACGAATGGTTCCTTCCGCCGGAGTGATGGTGGCTGCCATTCAGGCGGCC
AGTCAACGTATGCCCTTCACTTGTGGAAAACCCAATCCGTACATGTGCAT
CGACTTGATGCAAAAGGGAGTTATTCAGCCGGACAGGACTTTGATTATAG
GAGACACCATGTGCACAGATATCCTTTTGGGCTACAAGTGTGGCTTCCAA
ACCCTTTTGGTGGGCACCGGGGTTAACAGCTATCAGGATGCCATTGAGGC
TCAGGGATCTAAGGCTCCATTACTATATCAGCAAGTTCCTGATCTATATA
TGCCCAAACTATCCAATCTGTTGCCATTTTTATCTTCTCGAAATAGAGCA
AGCTTTCTAGACCAT
BO25738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32487-RA | 963 | CG32487-PA | 1..960 | 38..997 | 4725 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32487-RA | 1040 | CG32487-RA | 24..1001 | 20..997 | 4815 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3016446..3017233 | 807..20 | 3925 | 99.9 | Minus |
| 3L | 28110227 | 3L | 3016189..3016382 | 997..804 | 895 | 97.4 | Minus |
Blast to na_te.dros performed 2014-11-26 15:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5302..5334 | 348..380 | 111 | 81.8 | Plus |
BO25738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:55 Download gff for
BO25738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32487-RA | 1..960 | 38..999 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:37 Download gff for
BO25738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32487-RA | 21..1001 | 17..999 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:53 Download gff for
BO25738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32487-RA | 21..1001 | 17..999 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:53 Download gff for
BO25738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3016187..3016378 | 808..999 | 96 | <- | Minus |
| 3L | 3016446..3017236 | 17..807 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:37 Download gff for
BO25738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3016187..3016378 | 808..999 | 96 | <- | Minus |
| arm_3L | 3016446..3017236 | 17..807 | 99 | | Minus |
BO25738.pep Sequence
Translation from 16 to 1015
> BO25738.pep
MPPLELNMNLALNKTFQKRGCQILGLNKYGIQQWLKTIDTIIFDGNGVLW
SHGKVLENAAETFNALRAMGKKAFICTNNSVTSVEGICKYAQEMGFLVAK
NEILSSVQTLAKFMKEKKFKKKCYVVGGQGIVDELKLVGIESLPLDHSSL
QGFSMPDHIHSIYLDPNVGAVVVGSDKDFNTIKLTKACCYLRDSEVMFVA
TSRDAALPAAPGRMVPSAGVMVAAIQAASQRMPFTCGKPNPYMCIDLMQK
GVIQPDRTLIIGDTMCTDILLGYKCGFQTLLVGTGVNSYQDAIEAQGSKA
PLLYQQVPDLYMPKLSNLLPFLSSRNRASFLDH
BO25738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32487-PA | 320 | CG32487-PA | 1..320 | 8..327 | 1662 | 100 | Plus |
| CG5567-PA | 330 | CG5567-PA | 18..320 | 18..320 | 611 | 40.5 | Plus |
| CG32488-PB | 307 | CG32488-PB | 12..306 | 26..322 | 564 | 39.7 | Plus |
| CG32488-PA | 307 | CG32488-PA | 12..306 | 26..322 | 564 | 39.7 | Plus |
| CG11291-PA | 308 | CG11291-PA | 12..306 | 26..322 | 461 | 35.9 | Plus |
