BO25743.complete Sequence
895 bp assembled on 2010-06-29
GenBank Submission: KX796976
> BO25743.complete
GAAGTTATCAGTCGACATGGATGAGTTCGGCGTCTTCGATTACAAGCGCC
CTGCCAGCGCTACAGATCCCGATTGGAGGACCTCGTACTATCGAGGGCAT
CGCCACATTACAGACTTGAGAATGGGTAACAAGCTGAACGCCAAGTTTAC
GGATAAGGGTATTTATGTAAAAGATCCGCTGCTGTCCGAGAAGCCGACTT
CTGAGTGCATGGCCAACTATGTGTGGCAGTATAACGATCCCAACGCACTT
AGAAATCCCTCGCTCAACATGAAAACACAGTATATGAAACCATTTGAGGA
GGGTTCCCTTCGCTTTGTAAAGCGAAAGATGAAGCCCATTTCTAGTGTCA
GTCATGAGTCGTATGTACTTAAGGAGCTGCCGGAGGAACAGGAAATATTG
CCTGTAACAATGCCCACTCCGGTGGTAGCCACCAAGCTAGTCATCGACCG
TTCGGAGGCGTCCTTTAGCAAGTACCTTGATCCCTCCTCCACCACATACA
ATCTGTCGTATGTGCGCTGGGGTCCCGAGGACTTGTGTGGCGGAGTAGCT
GCCCACGACAATATTACATACTGGAATTGGACGGAGAAGATGCCGCCCAT
CCAGAAAGTATCCCGCGAAGAGGATCCTACAATGTGTGACGAGGGTAATA
CGCATAATTGCCCAAAGCGACGCTGTGAGTTTCAAAACCTCACCAAACGA
GTGCCGCATTCGGGAATGGTCACCGAGGTGCGCGCTAATTTCACGGATCC
ACAATTTCGAAGGGTTGAATTCGATCCAGAAGTTAAGCCCATACTCGTGC
ACGAGGAAGTCACTCCGTTTGCGGAGAAAAGCGAATACGGCATCTACGGA
TCGGGAGAACCAGTTATCAAATACGTTGCAAGCTTTCTAGACCAT
BO25743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:22:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8292-RA | 864 | CG8292-PA | 1..861 | 17..877 | 4290 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:22:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8292-RA | 1105 | CG8292-RA | 118..979 | 16..877 | 4295 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:22:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8216977..8217627 | 877..227 | 3240 | 99.8 | Minus |
2L | 23513712 | 2L | 8217687..8217900 | 229..16 | 1070 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:22:52 has no hits.
BO25743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:51 Download gff for
BO25743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8292-RA | 119..979 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:15 Download gff for
BO25743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8292-RA | 119..979 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:00 Download gff for
BO25743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8292-RA | 119..979 | 17..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:00 Download gff for
BO25743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8216975..8217624 | 230..879 | 99 | <- | Minus |
2L | 8217687..8217899 | 17..229 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:15 Download gff for
BO25743.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8216975..8217624 | 230..879 | 99 | <- | Minus |
arm_2L | 8217687..8217899 | 17..229 | 100 | | Minus |
BO25743.pep Sequence
Translation from 16 to 895
> BO25743.pep
MDEFGVFDYKRPASATDPDWRTSYYRGHRHITDLRMGNKLNAKFTDKGIY
VKDPLLSEKPTSECMANYVWQYNDPNALRNPSLNMKTQYMKPFEEGSLRF
VKRKMKPISSVSHESYVLKELPEEQEILPVTMPTPVVATKLVIDRSEASF
SKYLDPSSTTYNLSYVRWGPEDLCGGVAAHDNITYWNWTEKMPPIQKVSR
EEDPTMCDEGNTHNCPKRRCEFQNLTKRVPHSGMVTEVRANFTDPQFRRV
EFDPEVKPILVHEEVTPFAEKSEYGIYGSGEPVIKYVASFLDH
BO25743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8292-PA | 287 | CG8292-PA | 1..287 | 1..287 | 1559 | 100 | Plus |