Clone BO25743 Report

Search the DGRC for BO25743

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG8292-RA
Protein status:BO25743.pep: Imported from assembly
Sequenced Size:895

Clone Sequence Records

BO25743.complete Sequence

895 bp assembled on 2010-06-29

GenBank Submission: KX796976

> BO25743.complete
GAAGTTATCAGTCGACATGGATGAGTTCGGCGTCTTCGATTACAAGCGCC
CTGCCAGCGCTACAGATCCCGATTGGAGGACCTCGTACTATCGAGGGCAT
CGCCACATTACAGACTTGAGAATGGGTAACAAGCTGAACGCCAAGTTTAC
GGATAAGGGTATTTATGTAAAAGATCCGCTGCTGTCCGAGAAGCCGACTT
CTGAGTGCATGGCCAACTATGTGTGGCAGTATAACGATCCCAACGCACTT
AGAAATCCCTCGCTCAACATGAAAACACAGTATATGAAACCATTTGAGGA
GGGTTCCCTTCGCTTTGTAAAGCGAAAGATGAAGCCCATTTCTAGTGTCA
GTCATGAGTCGTATGTACTTAAGGAGCTGCCGGAGGAACAGGAAATATTG
CCTGTAACAATGCCCACTCCGGTGGTAGCCACCAAGCTAGTCATCGACCG
TTCGGAGGCGTCCTTTAGCAAGTACCTTGATCCCTCCTCCACCACATACA
ATCTGTCGTATGTGCGCTGGGGTCCCGAGGACTTGTGTGGCGGAGTAGCT
GCCCACGACAATATTACATACTGGAATTGGACGGAGAAGATGCCGCCCAT
CCAGAAAGTATCCCGCGAAGAGGATCCTACAATGTGTGACGAGGGTAATA
CGCATAATTGCCCAAAGCGACGCTGTGAGTTTCAAAACCTCACCAAACGA
GTGCCGCATTCGGGAATGGTCACCGAGGTGCGCGCTAATTTCACGGATCC
ACAATTTCGAAGGGTTGAATTCGATCCAGAAGTTAAGCCCATACTCGTGC
ACGAGGAAGTCACTCCGTTTGCGGAGAAAAGCGAATACGGCATCTACGGA
TCGGGAGAACCAGTTATCAAATACGTTGCAAGCTTTCTAGACCAT

BO25743.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8292-RA 864 CG8292-PA 1..861 17..877 4290 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG8292-RA 1105 CG8292-RA 118..979 16..877 4295 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8216977..8217627 877..227 3240 99.8 Minus
2L 23513712 2L 8217687..8217900 229..16 1070 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:22:52 has no hits.

BO25743.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:51 Download gff for BO25743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8292-RA 119..979 17..879 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:15 Download gff for BO25743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8292-RA 119..979 17..879 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:00 Download gff for BO25743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8292-RA 119..979 17..879 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:00 Download gff for BO25743.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8216975..8217624 230..879 99 <- Minus
2L 8217687..8217899 17..229 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:15 Download gff for BO25743.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8216975..8217624 230..879 99 <- Minus
arm_2L 8217687..8217899 17..229 100   Minus

BO25743.pep Sequence

Translation from 16 to 895

> BO25743.pep
MDEFGVFDYKRPASATDPDWRTSYYRGHRHITDLRMGNKLNAKFTDKGIY
VKDPLLSEKPTSECMANYVWQYNDPNALRNPSLNMKTQYMKPFEEGSLRF
VKRKMKPISSVSHESYVLKELPEEQEILPVTMPTPVVATKLVIDRSEASF
SKYLDPSSTTYNLSYVRWGPEDLCGGVAAHDNITYWNWTEKMPPIQKVSR
EEDPTMCDEGNTHNCPKRRCEFQNLTKRVPHSGMVTEVRANFTDPQFRRV
EFDPEVKPILVHEEVTPFAEKSEYGIYGSGEPVIKYVASFLDH

BO25743.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG8292-PA 287 CG8292-PA 1..287 1..287 1559 100 Plus