Clone BO25746 Report

Search the DGRC for BO25746

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG17173-RA
Protein status:BO25746.pep: Imported from assembly
Sequenced Size:1558

Clone Sequence Records

BO25746.complete Sequence

1558 bp assembled on 2010-06-29

GenBank Submission: KX797093

> BO25746.complete
GAAGTTATCAGTCGACATGAAGGTGATCAGCATTCGCTGGAAGACCTGCC
TGCCAGGCCTTATAATAGTTTCTTACCTGGTGTGTGCTCTGTTGTATTTC
GGAATGGATATAACAAAGATTGAGCCAGTGGAACCAAGAGTAGTGAAAAA
CAAGACCAAAGTGCCACGAATGTATGCCAAAACCATCAATCATGATGGCA
ACTGGGAGACTATTGTAACTAATCCGGAATTAAAGCCCAGATATCGGGTT
GGCGGCGGTAGGACTGGTGTCCAGTTCGTGATTGGAGTACCCACTGTACT
GCGACCGAAAAAGAACTATGTGCTCCAAACCGTGGACTGTCTGATCCGTC
GAATGACTCCGGAGCAGCGCGACAATTGTCTAATTGTTATATTCGTGGGT
GAAACTAAGCTGCAGTTCGCCAAGTTCATAGTAAGGGAACTGCGTGTGAA
TCATTCGACGCATATGCAAGCTGGCCTAATCGATGTCATTGCGCCACCCT
TGAATTACTATCCCAACTTCTCGAGACTCCACATCACGCTGAACGATGAT
CCGCAGCGAGTTCAGTGGAGGACCAAACAGAACCTGGACTACATATACCT
GATGTCCTATGCTAAGAGCAGGGGTTTGTACTACCTGCAACTGGAGGACG
ATGTGATGGCGAACGTGGGTTTCATGGACTACATCCAGAAGTTTGCAGTA
CTGCATGGCAGCTTTCGGATTGCCCAGCAGATCGATTGGATTGTGATGAG
CTTCAGTGAGCTGGGCTTCATAGGGAAGCTCTTTCGCACCTCCGTGCTGA
GCTCCTTCGTGGCGTACCTCAAGTTGTTCTACAATGACCAGCCCATTGAC
TGGCTGCTCCAGAGCTTCGTGACCCTGCAGAGCTGTCGCTGGGATAGTGT
TTCCGATCCCGAATGTCAGCGGGACTTCGAGTCCAGACTGCTGCGCTCCT
CGCAATCCCAGTTTCAGCATATGGGTGCACAATCGTCATTGGCGGATAAG
CAGCAATATCAAAAGGATGCCTTCTTTAACCATAACTTTGCAAGGCAGCG
CTTGAGGCATCTGCGACAGCCGCTCAACCTGATCGCCACCCATCGGAACT
CGCTGTTGAAGCATAATCTCGACCTGGTAGAGGGTGAAACGTTTATCTGG
ATCTATATGCCACGGATGCCCAAGATGATGAAGTATCTGATAACCAATCA
GTTCAAGCAGACGCAGCTTCACATACGCAATGCGAAGGACACAGCCCATA
ATCTGGCCGAGTTCAATATTGAACTGGTCAAGGGATCGCCCACCCTGGTG
GCCAACAGCTCCTCGACAAGGCAGTGTGGATTCGTCATGAGTCACACCGT
CCAATCGTTTGCAGAAAGGGATGGAAAAGCGGAGCTTCCCTATAATTATA
TGTACTACTACATTAAGGAGGAGCCCGAGGGGCTCAGCTGGTTCCGTCGA
TTCCGTTGGGCCTCCAATGCATCCTCTTTCCACGAGCTACGATCCACAAT
GGTATTACTCCTTCTTGTTTTTCAGTTTGTAAATAATTTAGCAAGCTTTC
TAGACCAT

BO25746.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG17173-RA 1527 CG17173-PA 1..1524 17..1540 7470 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17173-RA 1581 CG17173-RA 8..1532 16..1540 7475 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:26:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14767752..14769276 1540..16 7475 99.3 Minus
Blast to na_te.dros performed on 2014-11-26 15:26:04 has no hits.

BO25746.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:56 Download gff for BO25746.complete
Subject Subject Range Query Range Percent Splice Strand
CG17173-RA 9..1532 17..1542 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:49 Download gff for BO25746.complete
Subject Subject Range Query Range Percent Splice Strand
CG17173-RA 9..1532 17..1542 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:13 Download gff for BO25746.complete
Subject Subject Range Query Range Percent Splice Strand
CG17173-RA 9..1532 17..1542 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:13 Download gff for BO25746.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14767750..14769275 17..1542 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:49 Download gff for BO25746.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14760850..14762375 17..1542 99   Minus

BO25746.pep Sequence

Translation from 16 to 1558

> BO25746.pep
MKVISIRWKTCLPGLIIVSYLVCALLYFGMDITKIEPVEPRVVKNKTKVP
RMYAKTINHDGNWETIVTNPELKPRYRVGGGRTGVQFVIGVPTVLRPKKN
YVLQTVDCLIRRMTPEQRDNCLIVIFVGETKLQFAKFIVRELRVNHSTHM
QAGLIDVIAPPLNYYPNFSRLHITLNDDPQRVQWRTKQNLDYIYLMSYAK
SRGLYYLQLEDDVMANVGFMDYIQKFAVLHGSFRIAQQIDWIVMSFSELG
FIGKLFRTSVLSSFVAYLKLFYNDQPIDWLLQSFVTLQSCRWDSVSDPEC
QRDFESRLLRSSQSQFQHMGAQSSLADKQQYQKDAFFNHNFARQRLRHLR
QPLNLIATHRNSLLKHNLDLVEGETFIWIYMPRMPKMMKYLITNQFKQTQ
LHIRNAKDTAHNLAEFNIELVKGSPTLVANSSSTRQCGFVMSHTVQSFAE
RDGKAELPYNYMYYYIKEEPEGLSWFRRFRWASNASSFHELRSTMVLLLL
VFQFVNNLASFLDH

BO25746.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG17173-PA 508 CG17173-PA 1..508 1..508 2674 100 Plus
CG9384-PB 587 CG9384-PB 148..534 72..453 645 35.6 Plus
CG9384-PA 587 CG9384-PA 148..534 72..453 645 35.6 Plus