BO25754.complete Sequence
1099 bp assembled on 2010-06-29
GenBank Submission: KX798922
> BO25754.complete
GAAGTTATCAGTCGACATGGAACTGGAACGCGAACTGCCCACCGACGACG
CCTCCGTGGAGTTGGATGTGTCCGAACCATGGGGTGATGTGAGATCGTCA
GATAGCCAGCTTACCCTGAAGCAGAGTGAGAGCCAGGAGACGATAAGACC
ATTTGGGTATGAGTTAGCTGATCCATCCGAGCTTAGCTCCTACGACATTC
ACCTGGGTCTTCTAGTAGAGAAGGGTTTAATTGACATTAACTCATTGGAC
AAGCCCTCGAACGAGGACCTTACAGACTATCCGGACTATCCGGGTCTTTT
GTCCAGGTCGGCGGATCGTAGTGGAATTGCTGAGATAGTCAAAGAAATGC
GAAACGAATTCATGGACAAGCTGACCTCTAAGGCTAAGAGCTTCAAAGAA
ATCCTGATTAAGAAAGGCTTAATGGAGCCAAAGGACGAAAATCCTGCTAT
GCAGAAGAATGACTCTGAGAATAAAGCAAAGACCAAAGACGATTCTCAGA
TTCCAGATCGTAAGAACAAAGCGGGAAAACCTCTAGGAGAAGGCGACGTC
AGACGAAATGGTGAACTCGCCCTGCTCATCAATGAAATCAATCAGTTTAC
TTCTGGCATGGAGCAAGATCCGGACACTGCGGACTGGGCTCGGTTCCGGG
CCAACCTGCTGAAAATACATAAGTACTATGTGAGCGTCAATGAGCCGGAA
GGAAAAGGCCAAGAACGACCAAACAGCCAAATCGGCGCTGTCAGCGTTTT
AGAACCATCAGACATCAGCGGACCGAAGGAAGACCTCAGCAGTCGGGCCC
AGTACCTCCGTAAAAATCTCCGGGGTCTCGAATGCAAAATGCTTACCCTG
GACCACTCCGTTGATATCTTTAGCGACAAGTTCCATCGTAGTCTGGTCAC
TAAAGAGCATGTGGAGCGGGAAATGGTGTCGATTGCACTGGTGCGCGATA
AAATCGGACGACGCCTAAATCAGATGGAAGTGGAATTTCGCAGGGCCAAG
GAGGATTTATTTGATCGGGGCAGGAACCCAAAAAACCAAAGCTATATCGC
TTATTCAAAGAATAATCCTGATTGTGGAGCTGCAAGCTTTCTAGACCAT
BO25754.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32459-RA | 1068 | CG32459-PA | 1..1065 | 17..1081 | 5325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32459-RA | 1376 | CG32459-RA | 65..1129 | 17..1081 | 5325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22854830..22855500 | 1081..411 | 3355 | 100 | Minus |
| 3L | 28110227 | 3L | 22855792..22855995 | 220..17 | 1020 | 100 | Minus |
| 3L | 28110227 | 3L | 22855547..22855740 | 412..219 | 970 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:21:40 has no hits.
BO25754.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:47 Download gff for
BO25754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32459-RA | 81..1145 | 17..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:00 Download gff for
BO25754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32459-RA | 65..1129 | 17..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:33 Download gff for
BO25754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32459-RA | 65..1129 | 17..1083 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:33 Download gff for
BO25754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22854827..22855498 | 413..1083 | 99 | <- | Minus |
| 3L | 22855547..22855738 | 221..412 | 100 | <- | Minus |
| 3L | 22855792..22855995 | 17..220 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:00 Download gff for
BO25754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22847927..22848598 | 413..1083 | 99 | <- | Minus |
| arm_3L | 22848647..22848838 | 221..412 | 100 | <- | Minus |
| arm_3L | 22848892..22849095 | 17..220 | 100 | | Minus |
BO25754.pep Sequence
Translation from 16 to 1099
> BO25754.pep
MELERELPTDDASVELDVSEPWGDVRSSDSQLTLKQSESQETIRPFGYEL
ADPSELSSYDIHLGLLVEKGLIDINSLDKPSNEDLTDYPDYPGLLSRSAD
RSGIAEIVKEMRNEFMDKLTSKAKSFKEILIKKGLMEPKDENPAMQKNDS
ENKAKTKDDSQIPDRKNKAGKPLGEGDVRRNGELALLINEINQFTSGMEQ
DPDTADWARFRANLLKIHKYYVSVNEPEGKGQERPNSQIGAVSVLEPSDI
SGPKEDLSSRAQYLRKNLRGLECKMLTLDHSVDIFSDKFHRSLVTKEHVE
REMVSIALVRDKIGRRLNQMEVEFRRAKEDLFDRGRNPKNQSYIAYSKNN
PDCGAASFLDH
BO25754.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32459-PA | 355 | CG32459-PA | 1..355 | 1..355 | 1824 | 100 | Plus |
