Clone BO25762 Report

Search the DGRC for BO25762

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:62
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO25762.pep: Imported from assembly
Sequenced Size:760

Clone Sequence Records

BO25762.complete Sequence

760 bp assembled on 2010-06-29

> BO25762.complete
GAAGTTATCAGTCGACATGTACTATGACATGGTGATCGAGTTCATGTGGT
CCAATTCGTTTCTGAAAAGTCTTGTCTATGAGAGTCTGGGACTATTCGAT
TTGCCGGACATGAAACAGACTTATTCTTGGTATGTGCGACACATCCTGCG
AAACGAGTGCTCCGTGATGATGATTAGCGAAGATGAAACGCAAATAAGGG
CAGTGGGATTGCTGGAATGGATGACCGAGGAATGGCACTCCTGGGTCTTC
TTTCCCTCTTCGTTGCCCAGGAATCTGTTCCAGCAGATCATAATGATGAA
GAAGGAGCTCATCGATGCGACCAAAGCGAACATGGGCATCTCCACCTACG
ATGCACTGTTCGTCCACGAGATCGCCTTTCCGGATGAGCTCTACTTTAAC
CGGGATTTCCTGTCGACCATCTTCGATGTCTTTGGCTTTGTGGCCCAGCA
CATGCACATGCCGCGGGTCAGCTTCATCGCCCTCAGCTCCGTGGACCAGG
AGGCCGCCAGTCTGATCGATTACGAAGAGATCGGGCGGACTATCTACTCG
ATCTACAAGGTTGGCAACACCCGGCCCTTTGACATCCTTCGCGAGCTAGA
CGAGATGTACGCACTGCTGTTTGAACTGGCCGTCTCGCCGGTACTGAAGT
ACATTGAAATGCCCGGTTTCGAGGAGTTCCACGAGGCCCTGGATGCCAGG
TTGGCCAAGGAGGCAGCCGAAAAGCGCCACGACGACGATATAGCAAGCTT
TCTAGACCAT

BO25762.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG17375-RD 729 CG17375-PD 1..725 17..741 3625 100 Plus
CG17375-RC 729 CG17375-PC 1..725 17..741 3625 100 Plus
CG17375-RB 807 CG17375-PB 81..803 19..741 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG17375-RD 1280 CG17375-RD 197..922 16..741 3630 100 Plus
CG17375-RC 985 CG17375-RC 197..922 16..741 3630 100 Plus
CG17375-RB 981 CG17375-RB 196..918 19..741 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6804682..6805180 741..243 2495 100 Minus
2L 23513712 2L 6805245..6805360 244..129 580 100 Minus
2L 23513712 2L 6805429..6805542 132..19 570 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:20:25 has no hits.

BO25762.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:42 Download gff for BO25762.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RA 198..922 17..744 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:37 Download gff for BO25762.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RC 198..922 17..744 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:11 Download gff for BO25762.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RC 198..922 17..744 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:11 Download gff for BO25762.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6804678..6805179 244..744 99 <- Minus
2L 6805246..6805359 130..243 100 <- Minus
2L 6805432..6805544 17..129 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:37 Download gff for BO25762.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6804678..6805179 244..744 99 <- Minus
arm_2L 6805246..6805359 130..243 100 <- Minus
arm_2L 6805432..6805544 17..129 99   Minus

BO25762.pep Sequence

Translation from 16 to 760

> BO25762.pep
MYYDMVIEFMWSNSFLKSLVYESLGLFDLPDMKQTYSWYVRHILRNECSV
MMISEDETQIRAVGLLEWMTEEWHSWVFFPSSLPRNLFQQIIMMKKELID
ATKANMGISTYDALFVHEIAFPDELYFNRDFLSTIFDVFGFVAQHMHMPR
VSFIALSSVDQEAASLIDYEEIGRTIYSIYKVGNTRPFDILRELDEMYAL
LFELAVSPVLKYIEMPGFEEFHEALDARLAKEAAEKRHDDDIASFLDH

BO25762.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG17375-PD 242 CG17375-PD 1..242 1..242 1263 100 Plus
CG17375-PC 242 CG17375-PC 1..242 1..242 1263 100 Plus
CG17375-PB 268 CG17375-PB 28..268 2..242 1258 100 Plus