Clone BO25764 Report

Search the DGRC for BO25764

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG13581-RA
Protein status:BO25764.pep: Imported from assembly
Sequenced Size:658

Clone Sequence Records

BO25764.complete Sequence

658 bp assembled on 2010-06-29

GenBank Submission: KX797794

> BO25764.complete
GAAGTTATCAGTCGACATGCAGCGACTAGCTTCAGTTAATTCAAGAAATA
TAAGGCCATCTATTTCCGCGTTGCACACGGAGAAGCCCCACAATGTGGCC
AAGACTTCTCCAGCTTCTTCTAATCTATCAGATCATACAATTCCCGAGAA
GACAGCGCAGAAATCGGAATCGAAACCGAAAACGAAATCAACTCAAAATC
AAAGTGCAGGACTAGCGAGTGCTAGGTCACAACTGGTGATAAAGTCCAGT
GTGGGTGCTACTCCCAGGCCAGGATCAACGCCAGGCTCTGGAGCCACTAG
GAACACTGCCTCCAGTAGGACCCAGCACTTTTGCATTCCCGTGCGGAGCT
GTTATACTGTGACCAGCCGCACTCGCCGCTCCTCCGAGCACGCGGCCTTC
CTGTACCATCTGTCCCAGTTGGAGCAGACCGGATTTGGCAAGAGTGCGGT
GGATCCCATGAAGGCCGTGCCGGCGGCGGAGCTGCAACTGCTGCAGAGTG
GCCAGAGGACCACCTACCTGGAGCGGCGGTACGAACGCAGCCCAGACGAC
AAGTACAACTATCCGGAGGCCACCAGCTGGCGATATGGGTGGTTCCACCG
CGAGTCAGATCTCCTGCAGAAGCGCGTGCCCAGGCGAGATGCAAGCTTTC
TAGACCAT

BO25764.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG13581-RA 627 CG13581-PA 1..624 17..640 3090 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13581-RA 837 CG13581-RA 94..717 17..640 3090 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24506963..24507586 17..640 3090 99.7 Plus
Blast to na_te.dros performed on 2014-11-26 15:18:43 has no hits.

BO25764.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:40 Download gff for BO25764.complete
Subject Subject Range Query Range Percent Splice Strand
CG13581-RA 89..712 17..642 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:18 Download gff for BO25764.complete
Subject Subject Range Query Range Percent Splice Strand
CG13581-RA 94..717 17..642 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:42 Download gff for BO25764.complete
Subject Subject Range Query Range Percent Splice Strand
CG13581-RA 94..717 17..642 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:42 Download gff for BO25764.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24506963..24507586 17..642 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:18 Download gff for BO25764.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20394486..20395109 17..642 99   Plus

BO25764.pep Sequence

Translation from 16 to 658

> BO25764.pep
MQRLASVNSRNIRPSISALHTEKPHNVAKTSPASSNLSDHTIPEKTAQKS
ESKPKTKSTQNQSAGLASARSQLVIKSSVGATPRPGSTPGSGATRNTASS
RTQHFCIPVRSCYTVTSRTRRSSEHAAFLYHLSQLEQTGFGKSAVDPMKA
VPAAELQLLQSGQRTTYLERRYERSPDDKYNYPEATSWRYGWFHRESDLL
QKRVPRRDASFLDH

BO25764.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13581-PA 208 CG13581-PA 1..208 1..208 1073 100 Plus