BO25765.complete Sequence
628 bp assembled on 2010-06-29
GenBank Submission: KX796973
> BO25765.complete
GAAGTTATCAGTCGACATGGCCGTCCTGTACCTGCTGGGATGGGTTTCGC
TGGCCATACAGATCGTGTTCCTCACCCTGTCGATTGTGGCTGGTCTCTAT
TATCTGGCGGAGCTGGCCGAGGAGTACACGACGGCGGCTAGGAAGTGCAT
CCTATTTCTGATCAGCTTCACGATCTTCGTCTACATCCTGCTGCTGCTGT
TCGAGGACCTGCCGTGGAGCCTTATCATCTGCGGACTGGTGGCGCAGGGC
TTCCACCTGGGCATCATGAGTGGATTCCCCTTCGTGCGCCTGCTCTCGCT
GCCGCTGCTGGGCTCCCTGGCCATGCTGGTGGTCAATCACTTCCTGGCCT
TCCAGCATTTCGTCACTGTCTATGTGCCTTTCACGCAGGTGCTGGCTTAT
TTTACCATCTGCATGTGGATCGTGCCCTTCGCCCTGTTCGTCTCGCTGAG
TGCGAATGACAGTGTCCTGCCCACCACCGTCAGCGACCAGAGCCGGCGCA
GTCCGGACGTGGTCAGCAACTACTTCTCGCGCAACAAGAAGCAGGGCCTG
CTGTCGCTGTTCCAGTATCTGAAAGAGGCCCTGCTCCCTGGGCGGACCAA
GAAGGCCTTCGCAAGCTTTCTAGACCAT
BO25765.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3500-RB | 597 | CG3500-PB | 1..594 | 17..610 | 2940 | 99.7 | Plus |
| CG3500-RA | 597 | CG3500-PA | 1..594 | 17..610 | 2940 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3500-RB | 774 | CG3500-RB | 104..697 | 17..610 | 2940 | 99.7 | Plus |
| CG3500-RA | 948 | CG3500-RA | 278..871 | 17..610 | 2940 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23356853..23357158 | 391..86 | 1530 | 100 | Minus |
| 2R | 25286936 | 2R | 23356449..23356673 | 610..386 | 1095 | 99.1 | Minus |
| 2R | 25286936 | 2R | 23357219..23357288 | 86..17 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:17:41 has no hits.
BO25765.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:39 Download gff for
BO25765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3500-RA | 278..871 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:06 Download gff for
BO25765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3500-RA | 278..871 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:23 Download gff for
BO25765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3500-RA | 278..871 | 17..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:23 Download gff for
BO25765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23356447..23356670 | 389..612 | 98 | <- | Minus |
| 2R | 23356856..23357157 | 87..388 | 100 | <- | Minus |
| 2R | 23357219..23357288 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:06 Download gff for
BO25765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19243970..19244193 | 389..612 | 98 | <- | Minus |
| arm_2R | 19244379..19244680 | 87..388 | 100 | <- | Minus |
| arm_2R | 19244742..19244811 | 17..86 | 100 | | Minus |
BO25765.pep Sequence
Translation from 16 to 628
> BO25765.pep
MAVLYLLGWVSLAIQIVFLTLSIVAGLYYLAELAEEYTTAARKCILFLIS
FTIFVYILLLLFEDLPWSLIICGLVAQGFHLGIMSGFPFVRLLSLPLLGS
LAMLVVNHFLAFQHFVTVYVPFTQVLAYFTICMWIVPFALFVSLSANDSV
LPTTVSDQSRRSPDVVSNYFSRNKKQGLLSLFQYLKEALLPGRTKKAFAS
FLDH
BO25765.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3500-PB | 198 | CG3500-PB | 1..198 | 1..198 | 999 | 100 | Plus |
| CG3500-PA | 198 | CG3500-PA | 1..198 | 1..198 | 999 | 100 | Plus |
