Clone BO25767 Report

Search the DGRC for BO25767

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG30278-RA
Protein status:BO25767.pep: Imported from assembly
Sequenced Size:859

Clone Sequence Records

BO25767.complete Sequence

859 bp assembled on 2010-06-29

GenBank Submission: KX799505

> BO25767.complete
GAAGTTATCAGTCGACATGTCCGCTCCGGAGAACAGTTGTAGGCGGTGGA
TAAAAAAAAATTGGGTTGACGGTCCATGCAAGAAGTGCTTCGAATCCACC
TGCGGACCATGCATCGATTACAGGGTATCACCGCCTGCAGCAGACTTGCC
TGAGCCCCAGGCGGAGGTTGTTAAGGCGGTCATTGAACCGGATGGACCTG
TGCGTCAGGAGATCAACATCCGGGCGGAGTGCAGCAAGGGACGTCCGCTT
CTGGAATCCGACAAGGACAAACTGCGATGCTGTACCATGTGCGTGGCTCA
GGAGCAGAATCTGCACCCTAATCTCTGCTCGGCGCAATGCCGGCCACTCA
AAACCTATTTGCATTTGAATGAGTGGACAAAGCGACCCCTTCCCAAGCCC
ACATACAAACATTCTGTTATCCTGGACAATAACACCATAGTAGGTCGGTG
CTTCCCGATGAAATTCCAGCTGAGACGCACAAAAAAGAATTGCCTGGACT
GCGGAAATGAACTTTACTACCGGTATCCCATCACAAATAACAGCGATCTG
CTGCTGATCAAGAACTGCTGCGAAGTGGAGGTCTATCCCGCCAAGAAAGT
GGAAAATATGAACAACGTGAGGGTGACCAAGATATCGGGAGTCAAGAAGT
TCGCCAACAGTCTGCTGAAGGAGCACTCCGAGTGCCGGCTGTTCACCTTG
GCCAGCCAACTTGCGAAGCAGAAACCACCTTTGGCGCCTGATGTTAGGAT
GAGTCGGATGAGCAGGAAGAGCCGGAAGAGCCGAAAGAGCCGGAAGAGCA
GCAGAAAGAGTTCACTGTTCGGCAATAAAAAGGGTAAAAAAGCAAGCTTT
CTAGACCAT

BO25767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG30278-RC 828 CG30278-PC 1..825 17..841 3945 98.5 Plus
CG30278-RB 828 CG30278-PB 1..825 17..841 3945 98.5 Plus
CG30278-RA 828 CG30278-PA 1..825 17..841 3945 98.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG30278-RC 1164 CG30278-RC 104..928 17..841 3945 98.5 Plus
CG30278-RB 1004 CG30278-RB 64..888 17..841 3945 98.5 Plus
CG30278-RA 932 CG30278-RA 104..928 17..841 3945 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22217521..22217990 841..372 2260 98.7 Minus
2R 25286936 2R 22218041..22218397 373..17 1695 98.3 Minus
Blast to na_te.dros performed on 2014-11-26 15:52:24 has no hits.

BO25767.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:36 Download gff for BO25767.complete
Subject Subject Range Query Range Percent Splice Strand
CG30278-RA 102..920 17..835 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:51 Download gff for BO25767.complete
Subject Subject Range Query Range Percent Splice Strand
CG30278-RA 102..920 17..835 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:59 Download gff for BO25767.complete
Subject Subject Range Query Range Percent Splice Strand
CG30278-RA 104..922 17..835 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:59 Download gff for BO25767.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22218041..22218397 17..373 98   Minus
2R 22217527..22217988 374..835 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:51 Download gff for BO25767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18105032..18105493 374..835 98 <- Minus
arm_2R 18105546..18105902 17..373 98   Minus

BO25767.pep Sequence

Translation from 16 to 859

> BO25767.pep
MSAPENSCRRWIKKNWVDGPCKKCFESTCGPCIDYRVSPPAADLPEPQAE
VVKAVIEPDGPVRQEINIRAECSKGRPLLESDKDKLRCCTMCVAQEQNLH
PNLCSAQCRPLKTYLHLNEWTKRPLPKPTYKHSVILDNNTIVGRCFPMKF
QLRRTKKNCLDCGNELYYRYPITNNSDLLLIKNCCEVEVYPAKKVENMNN
VRVTKISGVKKFANSLLKEHSECRLFTLASQLAKQKPPLAPDVRMSRMSR
KSRKSRKSRKSSRKSSLFGNKKGKKASFLDH

BO25767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG30278-PC 275 CG30278-PC 1..275 1..275 1487 100 Plus
CG30278-PB 275 CG30278-PB 1..275 1..275 1487 100 Plus
CG30278-PA 275 CG30278-PA 1..275 1..275 1487 100 Plus
CG4286-PA 219 CG4286-PA 92..217 96..221 172 33.1 Plus