Clone BO25772 Report

Search the DGRC for BO25772

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG17207-RA
Protein status:BO25772.pep: Imported from assembly
Sequenced Size:694

Clone Sequence Records

BO25772.complete Sequence

694 bp assembled on 2010-06-29

GenBank Submission: KX796539

> BO25772.complete
GAAGTTATCAGTCGACATGGTGAGCATTGATCCTATAATATTCCAAGTAT
ACCACAAGCGTGTGGTAAAGATGCTGCTTTCAACTCTGGCCAGGATGCTG
ATCGTGTCCAGCTTTCTGGCGGATGCCATGCACATCTGCCAAAACTGGCG
ACTGGAGCAGAGCATTTTGAACATTAACTGTGGATGCGGGCGGATTGCGG
CTGGAGTGTGCATCAACCTGATGGCGATTGGACAATTTGTTGGCTCCGTG
CTGATTGTGACCGGAAAGAGGATTTATGCGGGGACAGGACTGCTTTGGCT
GGCAGGTTACCTTCGGATAGCCCTCAATCCGACGCAGCGAAACCTCGCCA
AGTACTTCCAGGTGTGCAATGTGATCAGTGCCTTGATGGTCATAATGCTG
AGGTCTCGACGCACCGCCGTTGTCGCGTTCCTGCTGCTTACCTTCGTGAA
CTGGAAGGATATGGAGCGGCATTTGTGGCTCGTCTTTTATAATTTCGGGG
AGCAGCTTTTGGGTCATCAGAAAAAGGACCCCGTGGGACTGATGGGCCTA
CAGCATGTGGGCATGCAAATCTTGGATGATCCTTCTTTGGCCTCGAGGGA
AAGTTTCTGGCACAAAGTATCCGTGGCTGGCGGATTTATCTTTATTGTCG
TGAATGGACATCTGCATATCATGTTTGCAAGCTTTCTAGACCAT

BO25772.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG17207-RA 663 CG17207-PA 1..660 17..676 3300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG17207-RA 1323 CG17207-RA 70..729 17..676 3300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12438411..12439070 676..17 3300 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:20:35 has no hits.

BO25772.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:43 Download gff for BO25772.complete
Subject Subject Range Query Range Percent Splice Strand
CG17207-RA 70..729 17..678 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:41 Download gff for BO25772.complete
Subject Subject Range Query Range Percent Splice Strand
CG17207-RA 70..729 17..678 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:13 Download gff for BO25772.complete
Subject Subject Range Query Range Percent Splice Strand
CG17207-RA 70..729 17..678 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:13 Download gff for BO25772.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12438409..12439070 17..678 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:41 Download gff for BO25772.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8264131..8264792 17..678 99   Minus

BO25772.pep Sequence

Translation from 16 to 694

> BO25772.pep
MVSIDPIIFQVYHKRVVKMLLSTLARMLIVSSFLADAMHICQNWRLEQSI
LNINCGCGRIAAGVCINLMAIGQFVGSVLIVTGKRIYAGTGLLWLAGYLR
IALNPTQRNLAKYFQVCNVISALMVIMLRSRRTAVVAFLLLTFVNWKDME
RHLWLVFYNFGEQLLGHQKKDPVGLMGLQHVGMQILDDPSLASRESFWHK
VSVAGGFIFIVVNGHLHIMFASFLDH

BO25772.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG17207-PA 220 CG17207-PA 1..220 1..220 1140 100 Plus