Clone BO25783 Report

Search the DGRC for BO25783

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG15605-RA
Protein status:BO25783.pep: Imported from assembly
Sequenced Size:490

Clone Sequence Records

BO25783.complete Sequence

490 bp assembled on 2010-06-29

GenBank Submission: KX799473

> BO25783.complete
GAAGTTATCAGTCGACATGGCGCAAAGGGAACGGAAGGCAGGAGTTGTAA
AGAGGGACAAGGCAGATAAGTGGAACCATGTAGAGACGGCTCGATACTTT
AGGGATTTGCAGGAAAATGAGGTGCGAACGATGCATTATTTGGGGCTGGC
CTACGTGGTTTTGTCTCGTCGCCCAAATTTGCAATTGAAAGTTCCACTGT
CCACTCAAAACTATGAAGATGGAGCCATTGTGGGAGCAGGGGAGCGAGGA
GGCTATGCCCTCCAGTTGCTCTTCACCTGTGCTGCGAACTATCCACTCGC
AAGGCCGCTGGTGGAGATCGTGGAGAAGCGCAATGTGAGCGACGCCTTTG
AGCAGGTTCTCCGCAAAGAGATTGACCTGATTTTGGAGGAACATCTTGGC
CTCCAGATGATTGTGCCGGTGGTGACCCGGCTGCAAATCACGCTGAATAC
CGAGATGAAAAGGCAGCGCTTTGCAAGCTTTCTAGACCAT

BO25783.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15605-RA 459 CG15605-PA 1..456 17..472 2250 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15605-RA 614 CG15605-RA 65..520 17..472 2250 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17126504..17126959 472..17 2250 99.6 Minus
Blast to na_te.dros performed on 2014-11-26 15:50:40 has no hits.

BO25783.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:43:33 Download gff for BO25783.complete
Subject Subject Range Query Range Percent Splice Strand
CG15605-RA 65..520 17..474 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:30 Download gff for BO25783.complete
Subject Subject Range Query Range Percent Splice Strand
CG15605-RA 65..520 17..474 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:26 Download gff for BO25783.complete
Subject Subject Range Query Range Percent Splice Strand
CG15605-RA 65..520 17..474 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:26 Download gff for BO25783.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17126502..17126959 17..474 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:30 Download gff for BO25783.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13014007..13014464 17..474 99   Minus

BO25783.pep Sequence

Translation from 16 to 490

> BO25783.pep
MAQRERKAGVVKRDKADKWNHVETARYFRDLQENEVRTMHYLGLAYVVLS
RRPNLQLKVPLSTQNYEDGAIVGAGERGGYALQLLFTCAANYPLARPLVE
IVEKRNVSDAFEQVLRKEIDLILEEHLGLQMIVPVVTRLQITLNTEMKRQ
RFASFLDH

BO25783.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15605-PA 152 CG15605-PA 1..152 1..152 771 100 Plus
CG5515-PD 244 CG5515-PD 2..125 25..152 159 30.2 Plus
CG5515-PC 244 CG5515-PC 2..125 25..152 159 30.2 Plus
CG5515-PB 244 CG5515-PB 2..125 25..152 159 30.2 Plus
CG5515-PA 244 CG5515-PA 2..125 25..152 159 30.2 Plus