BO25787.complete Sequence
1387 bp assembled on 2010-06-29
GenBank Submission: KX799170
> BO25787.complete
GAAGTTATCAGTCGACATGGTAAACTTTGTGCACCCCGAGGAAATGTATC
TCTTTGTGGAGAGCATTCGTCCATTTGAGGTGCGTGAGGTGGGCAGCCCG
AAGTGGCTGGAGGTGCACGAGATGATCCTCGGGCTGAGCCAGCAGGCCGC
CTTGGAGCTGTCCCAGAATCGCGAGGAGGAGGTGAAGGAGTTCCTCATCT
CGCGCGACAAGCTACGCGTGCTGATCCACGAAGCCTATTGCGTAACGTTG
TGGAAGACGCGTGTTCTGCCGCATCTGCTGGAGATTGATCCCAATCCGCA
GGCCACGTTCCTTATCTACACGGTGCTATATCACGAGGCTGCTTTGGTAG
CGCTTCTGGATGTGTGTCTCTACCATCCCAGTGGCTGTGAGACGCTGCAG
GAGTCTGTGCTGGATTTGATTGACTATTGCGCCCAGGCCATTTCCCAGGT
CATTGGCTTGGTCAGCATGGGTTACCACGAGAACGAGACAAAGCTGGACG
TGGATGAGGCAGTGCTCACGGAGCTGGAGCGCCAGAAGCGCGACTTTATC
TATAAGATTGGACTGCGCTGCATCTCAGTGCTGAACTACATAGCAGATAA
TGTGACATTGTTTCATCTAAGCGCCGCACGCCGTTTGCTGGTGACCCATG
ACATTCCGTGGCTCATGGCAGATGTACTTAGCTTCCGTCCGTGGCAGAGA
AAGACCAGCAAGGGCATTCAGAAGTTCATCGACGAGAAGTGGACCAATGT
GGACGACGTCACCAAGATTGTCAAGCCAGAGGCGCAGGCCTGGTTTTGTG
TGCGTCAGCTGCTCCTTAATCCTCAGATCATGGAGAACTATGCTTTCAAC
GAGGCACGCTGCAAGCAGTTACACAAGCTTTTGGGTCTCATGCACGAGCC
GTTGCTGGACCAGCTGCCGCCACTTATAGAGCTAAAGGTGTTCCTGAGCC
GCCTGACGCTCAGCGGCAATACGGCCAAGACACAGCCGCTCTTGCTGGAG
GACATTCCGCAGATCCAGGAGGAACTGCTCAAGGATGTCGAGGAAAATGG
CGGCTTCTATCAGATTGCCCAGGATCAGGACTCGGTTTTCCTTAGCAAGA
ACAAGGAAAACATCTGCGCTTTGGCCACTCGCCTCAGCAAAGCCTACGGC
ACGGACTTGCTCTGTGAACTGGAGCAGAATATGGATGATCTCAAGATGGG
CGAAGCAAAGGATGCCGGCGCTGGTGGCGATGGAGATACGGACCATACCT
GCGCCACTTGCCAGGCAAAGGCCAAAAAGAAATGTGCCTGCTGCAAGAAG
GTGCACTACTGCTCCCGTGATTGTCAGCTCAAGGATTGGCCACAGCACAA
GCTCGTCTGCCTTAAAACTGCAAGCTTTCTAGACCAT
BO25787.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zmynd10-RA | 1356 | CG11253-PA | 1..1353 | 17..1369 | 6630 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zmynd10-RA | 1497 | CG11253-RA | 79..1431 | 17..1369 | 6630 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13025689..13026359 | 687..17 | 3280 | 99.3 | Minus |
| 3L | 28110227 | 3L | 13024938..13025379 | 1317..876 | 2150 | 99.1 | Minus |
| 3L | 28110227 | 3L | 13025440..13025630 | 877..687 | 955 | 100 | Minus |
| 3L | 28110227 | 3L | 13024829..13024881 | 1369..1317 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:37:02 has no hits.
BO25787.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:18 Download gff for
BO25787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11253-RA | 79..1431 | 17..1371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:55 Download gff for
BO25787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11253-RA | 79..1431 | 17..1371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:32 Download gff for
BO25787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zmynd10-RA | 79..1431 | 17..1371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:32 Download gff for
BO25787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13024827..13024880 | 1318..1371 | 96 | <- | Minus |
| 3L | 13025440..13025629 | 688..877 | 100 | <- | Minus |
| 3L | 13024938..13025377 | 878..1317 | 99 | <- | Minus |
| 3L | 13025689..13026359 | 17..687 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:55 Download gff for
BO25787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13017927..13017980 | 1318..1371 | 96 | <- | Minus |
| arm_3L | 13018038..13018477 | 878..1317 | 99 | <- | Minus |
| arm_3L | 13018540..13018729 | 688..877 | 100 | <- | Minus |
| arm_3L | 13018789..13019459 | 17..687 | 99 | | Minus |
BO25787.pep Sequence
Translation from 16 to 1387
> BO25787.pep
MVNFVHPEEMYLFVESIRPFEVREVGSPKWLEVHEMILGLSQQAALELSQ
NREEEVKEFLISRDKLRVLIHEAYCVTLWKTRVLPHLLEIDPNPQATFLI
YTVLYHEAALVALLDVCLYHPSGCETLQESVLDLIDYCAQAISQVIGLVS
MGYHENETKLDVDEAVLTELERQKRDFIYKIGLRCISVLNYIADNVTLFH
LSAARRLLVTHDIPWLMADVLSFRPWQRKTSKGIQKFIDEKWTNVDDVTK
IVKPEAQAWFCVRQLLLNPQIMENYAFNEARCKQLHKLLGLMHEPLLDQL
PPLIELKVFLSRLTLSGNTAKTQPLLLEDIPQIQEELLKDVEENGGFYQI
AQDQDSVFLSKNKENICALATRLSKAYGTDLLCELEQNMDDLKMGEAKDA
GAGGDGDTDHTCATCQAKAKKKCACCKKVHYCSRDCQLKDWPQHKLVCLK
TASFLDH
BO25787.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zmynd10-PA | 451 | CG11253-PA | 1..451 | 1..451 | 2374 | 100 | Plus |
