BO25789.complete Sequence
745 bp assembled on 2010-06-29
GenBank Submission: KX797356
> BO25789.complete
GAAGTTATCAGTCGACATGCTTAGTTCAAAAAGTGACACTTCTGGAGACG
ATATCTCTATAACTGCACAAGCAGAAAAAAGAGTGGATGATAGCATCAGA
GCGCCATCTATTGGCTGGAATGCTGAGCACAAAGATGTTCAGATTCCAAG
GGACCAACTAACCCACAGGCAGATCAGCAAGTGCAATTTGTTTGAGGAAT
ACATCAAGCTCCCAAAGAGTGAATATGGACAAACAAGCCGCATGAAGCGA
TTCCGATCCGAAGAGTTAGCTATTAAGCAAGAAGATCAAATCGTGGAGCA
TAGATCATCGAGTCTTTCGCGGCTATCGGATGTCACAATCAAGCCCACCT
GCGAGGTGAGTAGTCAGACTTCGTGGACAGCAGCGGACGAGAGTAATATG
AATAGCAAGGATTTGGAGGCGAAGCTGGCGGCTGTACGCGGCGGTGGTAT
CGATCTCGAAACGGACAAGCCCAGCAAGATCCAGCAGCACACGATCCACA
TCGAGGTGGAGTCGGTGACATCGGCCACGGCTATGCAAAGACCCCCACTG
CACCAAAGGATGTGGCAGGTCCTTGTGCAGACGGCGGATACGATTGTCGC
ATTCGCCTCTATAATCGGCGAGAATTTAACAGTGGCACTCTTCATTGTCC
TGTGCCTGTGGTGCCTTTACCTCTTACTAAGCCACTTTTATGGCAACTTG
CAGACCAATGTCGGCATGCCGTCCAAAGCAAGCTTTCTAGACCAT
BO25789.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-RA | 714 | CG16852-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-RA | 835 | CG16852-RA | 48..760 | 15..727 | 3565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13541124..13541571 | 280..727 | 2240 | 100 | Plus |
2L | 23513712 | 2L | 13540798..13541064 | 15..281 | 1335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:35:46 has no hits.
BO25789.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:16 Download gff for
BO25789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 50..760 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:37 Download gff for
BO25789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 50..760 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:00 Download gff for
BO25789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 50..760 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:00 Download gff for
BO25789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13541126..13541571 | 282..729 | 99 | | Plus |
2L | 13540800..13541064 | 17..281 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:37 Download gff for
BO25789.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13540800..13541064 | 17..281 | 100 | -> | Plus |
arm_2L | 13541126..13541571 | 282..729 | 99 | | Plus |
BO25789.pep Sequence
Translation from 16 to 745
> BO25789.pep
MLSSKSDTSGDDISITAQAEKRVDDSIRAPSIGWNAEHKDVQIPRDQLTH
RQISKCNLFEEYIKLPKSEYGQTSRMKRFRSEELAIKQEDQIVEHRSSSL
SRLSDVTIKPTCEVSSQTSWTAADESNMNSKDLEAKLAAVRGGGIDLETD
KPSKIQQHTIHIEVESVTSATAMQRPPLHQRMWQVLVQTADTIVAFASII
GENLTVALFIVLCLWCLYLLLSHFYGNLQTNVGMPSKASFLDH
BO25789.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:38:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-PA | 237 | CG16852-PA | 1..237 | 1..237 | 1209 | 100 | Plus |