BO25792.complete Sequence
1063 bp assembled on 2010-06-29
GenBank Submission: KX797226
> BO25792.complete
GAAGTTATCAGTCGACATGCATAAAATTGTTTGGTTTGGAACTTTAAATA
AGTCGATTGGCTACATCGGGAAAAAGAAGACCTGTCTTCTGAGTCCATGC
GAGAAAATATGCCTGAATTCAGCTAGAAAAACAGTACAGAGATGCGACAA
AAACTATTCACCACCAAAGTTAAGAAGAATCAAGAATTTCTATACCTACA
GTGTTGTATTGGGGAGTCTCTTCAGTATAGTCATGTGGGCCATCTATAAG
CTGGGCAAGCCCGAGGAAGACCATCGGGGTCCCATAGAAGATGAGTTCAG
TCAGCTTCCCTGGTTCCGCCAGTACATAATGAGGATGTGGCACACACTTC
AGTATTATGAAAAAATGATGGAAGAGCCCCAGATGGCAAGGCTGCTGCCA
AATGTTGTCCCACCGCCGTATATACAACCTCCCTATTCACTGGTGCTGGA
AATCAAAGACGTACTGGTGCATCCAGATTGGACTTATCAGACGGGGTGGC
GGTTTAAAAAGCGGCCTGGTGTGGATTACTTTCTTCAGCAGTGCAGTCGA
AATTTTGAAATTGTAATATATACTTCTGAACAAGGTATGACCGCATTCCC
CCTTCTGGATGCTTTAGATCCCTATGGCTACATAAAATATCGGCTAGTAA
GAGGTGCCACGGACTTGGTAGAGGGTCAGCATACCAAGAACCTCGATTAT
CTTAACAGGGATCTGAGCCGTGTGATAGTGGTGGACTGTGATCCGTATAC
CACTCCCCTGCATCCCGATAATAGCTTGGTGCTCACAAAGTGGCTGGGTA
ACGATGATGATGTCCAGCTCTTTGATCTCACGGCTTTCCTGCAGTTGATT
GCCGAACACCAAGTAAATGATGTAAGGGAGGTGCTGCGATACTATCGCCA
ATTCGAGGACCCCATGGAACAGTTTAAGGACAACCAACGTCGACTGCAGG
AGCAGAGTCAGGAAAGCATTCAGAATTTACCAACTAGTGAACGTCAGTGG
AACTTAACTTTATTGGGACGCTCCCTTCGAGGGTCTTCAATCAAAGCAAG
CTTTCTAGACCAT
BO25792.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-RA | 1032 | CG6691-PA | 1..1029 | 17..1045 | 5100 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-RA | 1107 | CG6691-RA | 57..1085 | 17..1045 | 5100 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22079688..22080716 | 17..1045 | 5100 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:34:30 has no hits.
BO25792.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:15 Download gff for
BO25792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 17..1045 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:23 Download gff for
BO25792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 57..1085 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:30 Download gff for
BO25792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 57..1085 | 17..1047 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:30 Download gff for
BO25792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22079688..22080716 | 17..1047 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:23 Download gff for
BO25792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22079688..22080716 | 17..1047 | 99 | | Plus |
BO25792.pep Sequence
Translation from 16 to 1063
> BO25792.pep
MHKIVWFGTLNKSIGYIGKKKTCLLSPCEKICLNSARKTVQRCDKNYSPP
KLRRIKNFYTYSVVLGSLFSIVMWAIYKLGKPEEDHRGPIEDEFSQLPWF
RQYIMRMWHTLQYYEKMMEEPQMARLLPNVVPPPYIQPPYSLVLEIKDVL
VHPDWTYQTGWRFKKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDAL
DPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHP
DNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYYRQFEDPM
EQFKDNQRRLQEQSQESIQNLPTSERQWNLTLLGRSLRGSSIKASFLDH
BO25792.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-PA | 343 | CG6691-PA | 1..343 | 1..343 | 1849 | 100 | Plus |
| ttm50-PB | 428 | CG2713-PB | 149..428 | 61..335 | 911 | 59.3 | Plus |
| ttm50-PA | 428 | CG2713-PA | 149..428 | 61..335 | 911 | 59.3 | Plus |
| ttm2-PA | 409 | CG12313-PA | 124..382 | 53..312 | 771 | 54.4 | Plus |
| CG5830-PA | 329 | CG5830-PA | 130..294 | 165..331 | 197 | 28.1 | Plus |
