Clone BO25794 Report

Search the DGRC for BO25794

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG12307-RA
Protein status:BO25794.pep: Imported from assembly
Sequenced Size:580

Clone Sequence Records

BO25794.complete Sequence

580 bp assembled on 2010-06-29

GenBank Submission: KX793966

> BO25794.complete
GAAGTTATCAGTCGACATGAAAAACTCAACTGTGCAAGACAGTTCACCGC
AAGTGCCACAGAATGGCATGGTCACCTATGGCAGCGGGCTCGTCTTTGGC
GGGAAAGTTTATCCGGTATTGGTGGACGGAAAGCCAATACAGCCACCCTT
AGGTGCTCATCAGGCAGCAATGCAACAGCGCATGCAGATGCAGCAGGTTC
AGCCACAGGCGCCACATACCAACTGCCCCAAGTCCATTGTCCAACAACCT
ATATATCAACGAATGGAGACCCGGTATCCTGCGCCCTCATACATGTCCAA
GCCAAGCCAACAGAGCTCTGTGAGTTGTCCTGGCCCAGTCATGGTGCAGC
AGCACTCGCCGTCTAACAATCTGGCGATGATGCAACCGTTGCAGGCGCAG
ATTTTACAGCGCCAGCAAATGCAAACCTCCATGGGCAGTCCTTGCGGCTA
CTACAACCTGCCAACGAATGCGGGTGGTGATTCCTGCGGCTGGGACGGCT
ATGCCATGATGCAGCCAATGGATGCCAACAAGCCGTATACCTTTGGCTGG
AGTCTTACCGATGCAAGCTTTCTAGACCAT

BO25794.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-RA 549 CG12307-PA 1..546 17..562 2700 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-RA 680 CG12307-RA 72..617 17..562 2700 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11651394..11651939 562..17 2700 99.6 Minus
Blast to na_te.dros performed on 2014-11-26 15:38:07 has no hits.

BO25794.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:22 Download gff for BO25794.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 63..608 17..564 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:09 Download gff for BO25794.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 72..617 17..564 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:55 Download gff for BO25794.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 72..617 17..564 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:55 Download gff for BO25794.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11651391..11651939 17..564 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:09 Download gff for BO25794.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11651391..11651939 17..564 99   Minus

BO25794.pep Sequence

Translation from 16 to 580

> BO25794.pep
MKNSTVQDSSPQVPQNGMVTYGSGLVFGGKVYPVLVDGKPIQPPLGAHQA
AMQQRMQMQQVQPQAPHTNCPKSIVQQPIYQRMETRYPAPSYMSKPSQQS
SVSCPGPVMVQQHSPSNNLAMMQPLQAQILQRQQMQTSMGSPCGYYNLPT
NAGGDSCGWDGYAMMQPMDANKPYTFGWSLTDASFLDH

BO25794.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-PA 182 CG12307-PA 1..182 1..182 987 100 Plus