Clone BO25795 Report

Search the DGRC for BO25795

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:257
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG31624-RA
Protein status:BO25795.pep: Imported from assembly
Sequenced Size:568

Clone Sequence Records

BO25795.complete Sequence

568 bp assembled on 2010-06-29

GenBank Submission: KX796282

> BO25795.complete
GAAGTTATCAGTCGACATGACTGAGAGCATTGTGTGTCACAAGTGCCAGG
AGGCCATCACCAAGCGTATGATCACCGCCCTGGGCAAGACGTGGCACCCG
GAGCACTTCCTGTGCCACCACTGCGATGAGCAGATCCTGGATGCCACCTT
CAATGTTCAGAGCGGAGAACCAGTGTGCAACAAGTGCTTCGTGGAGCGGT
ACACCTACACCTGTGCCGGCTGCAAGAAGCCGATCCTTGAAAAAACCATC
TGCGCCATGGGGGAGAGGTGGCACGAAGCTTGCTTTTGCTGCGGCGGTGC
CTGCAAAAAGCCGCTCGCCAGTCAAACGTTCTATGAGCGCGACGGCAAGC
CCTATTGCAAACAGGATTACGAGAACCTCTTTGCTGCCAGGTGCGCCAAG
TGCGAGAAGCCTATAACGGACTCAGCGGTGCTCGCCATGAACGTGAAGTG
GCATCGCAATTGCTTCCAGTGCAACAAATGCGAGAATCCTATAACCTCGC
AGACTTTTACCATCGACGGGGACAAGCCCGTGTGCCCCGCCTGCAATTGC
GCAAGCTTTCTAGACCAT

BO25795.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG31624-RC 537 CG31624-PC 1..534 17..550 2655 99.8 Plus
CG31624-RB 537 CG31624-PB 1..534 17..550 2655 99.8 Plus
CG31624-RA 537 CG31624-PA 1..534 17..550 2655 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31624-RC 979 CG31624-RC 87..620 17..550 2655 99.8 Plus
CG31624-RB 830 CG31624-RB 80..613 17..550 2655 99.8 Plus
CG31624-RA 888 CG31624-RA 189..722 17..550 2655 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21199404..21199937 550..17 2655 99.8 Minus
2L 23513712 2L 21201719..21202252 550..17 2535 98.3 Minus
2L 23513712 2L 19404347..19404402 124..69 190 89.3 Minus
Blast to na_te.dros performed on 2014-11-26 15:37:49 has no hits.

BO25795.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:20 Download gff for BO25795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31624-RA 77..610 17..552 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:06 Download gff for BO25795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31624-RA 189..722 17..552 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:49 Download gff for BO25795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31624-RA 189..722 17..552 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:49 Download gff for BO25795.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21199402..21199937 17..552 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:06 Download gff for BO25795.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21199402..21199937 17..552 99   Minus

BO25795.pep Sequence

Translation from 16 to 568

> BO25795.pep
MTESIVCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSG
EPVCNKCFVERYTYTCAGCKKPILEKTICAMGERWHEACFCCGGACKKPL
ASQTFYERDGKPYCKQDYENLFAARCAKCEKPITDSAVLAMNVKWHRNCF
QCNKCENPITSQTFTIDGDKPVCPACNCASFLDH

BO25795.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31624-PC 178 CG31624-PC 1..178 1..178 1034 100 Plus
CG31624-PB 178 CG31624-PB 1..178 1..178 1034 100 Plus
CG31624-PA 178 CG31624-PA 1..178 1..178 1034 100 Plus
CG31988-PB 178 CG31988-PB 1..178 1..178 1001 96.1 Plus
CG31988-PA 178 CG31988-PA 1..178 1..178 1001 96.1 Plus