BO25805.complete Sequence
1465 bp assembled on 2010-06-29
GenBank Submission: KX799105
> BO25805.complete
GAAGTTATCAGTCGACATGTATGAGTTTCCGCTGCTAAAAACCGATGGCC
TTCGCGGTGGCGTCGTCTACTATGATGGTCAGGTGGATGATGCCCGGATG
TGCGTCGCATTGGTGATGACCGCGGTGGCCCTGGGCGCCAATGTGGGCAA
CCACATGGAGGTGGTGGAGATTATGCCACAGGAGGGATGCTGCCGAGTTG
TTAGCGTTAAGGACAAGATCTCCTGCGAGCAGTTCTACATTCAGTCCAAG
GCCGTGATCAATGCCACAGGCTCCAGCACAGATGCCATCCGGCAGATGGA
CAAGGAGGGAACCGCACCCATTCTATTGCCCACTCTGGAAACCCAAGTAT
CCCTGCCCCGCTACTTTGGTTCCGGACATTACGGTTTGTTGAGTCCGGCT
CTGAAAAATGATGATCTCACTGTATATATGGTGCCGTTTGAGAACCACAT
GGTTCTAGGCAGTCGCGAAGTGGACCTCGATGAAGTGTCTAGCCGTGGAA
GTCCCACTCCCGATCCAGATGACGTGGATTGTCTGCTAGAAGCAGCCAAG
AAAAGGATGGATCCCTGCGTGGAGCTGGGGCGCTGTCACGTCCTTAGTGC
CTGGACGGCGATCAAGGCCAGTGTGAGCTGTCCAACCGACAAGGAAAATG
ATGATGACAAGCGTGGAACACCGATCAACAGCTATATGATCGAGGTTAGT
CCCGACGGTCTTATCACGCTGGCCGGCGGACGGTGGAGCAGTTACCGCGT
GATGGCAGCCGATGCCGTGGATTTGGCCATTAAATCTTGTGGACTATGCG
ACGATCATGTGACCTCCAGTTGGACACAGGACTTGAAGTTAGACGGAGCC
GAATCATGGTGTTGCATGCTGCCGCTAGAATTCGTGCAGGACTACGGTGT
GCCCATGGACGTGGCGCATCATATCTCCGATTCCTATGGGTACAATGGAC
ATGCACTGTTCTCTCAGGCTCCTGATCTGAAGAAGCGCCTCCATCCGAGC
TTCCCCTATATAGAGGCAGAGATTCAGTATGCCATGCGAAATGAGTACGC
CTGCACCCTTGTGGACATCATCGCACGACGGTTGCGCATAGCCTTCGTGG
ATGCGGCCGCCACGCTGCACATGCTGCCTAGAATTCTCAAGATCATGGCC
GGCGAGAATGGTTGGGATGAGGAAGAGCAAAAGGAGCAGATGGTGGCGGC
CCAGGAGTTTCTGGTGCGCCAAATGGGTCTGGGATCAATAGTCCAACCCA
GGAGCACCAGCAAGAGCAAGCCGAAAAAGAAGGGCTCCTCGGAGGGATGT
TGCTGCCGGGCGGCAGTTCGCAGGGGGGCCAGGAGCTACTCGATGGAAAT
ATCAAAGAAGATTTGCGTTCAACCCTTGGTCCAACATAGATCCATGTCTA
GCATGTTCTTGCCCCTTATGACGAGCTTAAGTTATGGACTCGGACGCGCA
AGCTTTCTAGACCAT
BO25805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-RD | 1881 | CG7311-PD | 447..1878 | 16..1447 | 7160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-RD | 2316 | CG7311-RD | 747..2178 | 16..1447 | 7160 | 100 | Plus |
| CG7311-RE | 2294 | CG7311-RE | 725..2156 | 16..1447 | 7160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13709014..13710445 | 16..1447 | 7160 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:29:57 has no hits.
BO25805.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:08 Download gff for
BO25805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RB | 726..2156 | 17..1449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:33 Download gff for
BO25805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 726..2156 | 17..1449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:43 Download gff for
BO25805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 726..2156 | 17..1449 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:43 Download gff for
BO25805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13709015..13710445 | 17..1449 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:33 Download gff for
BO25805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13709015..13710445 | 17..1449 | 99 | | Plus |
BO25805.pep Sequence
Translation from 16 to 1465
> BO25805.pep
MYEFPLLKTDGLRGGVVYYDGQVDDARMCVALVMTAVALGANVGNHMEVV
EIMPQEGCCRVVSVKDKISCEQFYIQSKAVINATGSSTDAIRQMDKEGTA
PILLPTLETQVSLPRYFGSGHYGLLSPALKNDDLTVYMVPFENHMVLGSR
EVDLDEVSSRGSPTPDPDDVDCLLEAAKKRMDPCVELGRCHVLSAWTAIK
ASVSCPTDKENDDDKRGTPINSYMIEVSPDGLITLAGGRWSSYRVMAADA
VDLAIKSCGLCDDHVTSSWTQDLKLDGAESWCCMLPLEFVQDYGVPMDVA
HHISDSYGYNGHALFSQAPDLKKRLHPSFPYIEAEIQYAMRNEYACTLVD
IIARRLRIAFVDAAATLHMLPRILKIMAGENGWDEEEQKEQMVAAQEFLV
RQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRRGARSYSMEISKKIC
VQPLVQHRSMSSMFLPLMTSLSYGLGRASFLDH
BO25805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-PD | 626 | CG7311-PD | 150..626 | 1..477 | 2504 | 100 | Plus |
| Gpo-1-PD | 724 | CG8256-PD | 198..599 | 4..404 | 754 | 39.7 | Plus |
| Gpo-1-PA | 724 | CG8256-PA | 198..599 | 4..404 | 754 | 39.7 | Plus |
| Gpo-1-PB | 724 | CG8256-PB | 198..599 | 4..404 | 754 | 39.7 | Plus |
| Gpo-1-PC | 724 | CG8256-PC | 198..599 | 4..404 | 754 | 39.7 | Plus |
