Clone BO25814 Report

Search the DGRC for BO25814

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:258
Well:14
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO25814.pep: Imported from assembly
Sequenced Size:814

Clone Sequence Records

BO25814.complete Sequence

814 bp assembled on 2010-06-29

> BO25814.complete
GAAGTTATCAGTCGACATGGAGGGGAAAAAAAAACCGGCAAAACAGAACG
AAGTCAAAGAAAACGACAAGGAAAAAGGCATGGAAAAAGGCAAGGAAAAA
GGCAAGGAAAAAGGCAAGGAAAAGAAGACCAAAGAGCCAAACTTTAGATC
CTCTGAGGACCGTCCTCCAGTGCCCCAAAGTAAAGATACTACTCACGGGA
CCGAAGAAAGTCACCATGGTGACGGCGACTTCGGTGGTCCTGATGGCGAT
AGAGAAAAAGGCAAGAACCAGCCTGACGGGAAAAGCGGTATCGTAGATCA
AAACCAGGGAAAAGACAAGGACAAGGGCAAAGGTAAGGAGAAAGGCATGA
ATAAGAAGGGAAAGGGTAAAAAGAAACCGAAAGATAAGGATGAGGATAAG
AATACCAAGGACAACCGGAGTGAAAAGGACTGCCCCTGCGAGATTTGTTG
TCCGCCAAAAGAAGAGGACACTCCGCTGATCAAGGAGATGCGCCGGCGGG
ATCGAGAGCGCCAGGTGCGCGATTACCTCCGCCAAATGCGTCACCGGCAA
TACATGGAGTGCAAGGACCTCAAATACCCGAGCCCACACCATAAGTGTGA
TCCAATCCAGTGCAACAACCAGTTCTGTAGCAATCCACGTATGCAAACTC
ATTTCGCCAGAGTCCAGGCAGTGCGAAGCTTGCAGCAGATCCTGCAGAGA
AGAAATCGACAAGGCGATGTCAAAATCTCCAAGGATCTGGACTCACTTTT
AGCAAGGCTGTGCAATAGCCTGACAATAAGTGATGGTCACTGCAGAGCAA
GCTTTCTAGACCAT

BO25814.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-RB 2049 CG43755-PB 1273..2046 23..796 3855 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-RB 2333 CG43755-RB 1412..2185 23..796 3855 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 327577..328350 796..23 3855 99.9 Minus
Blast to na_te.dros performed on 2014-11-26 15:29:42 has no hits.

BO25814.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:07 Download gff for BO25814.complete
Subject Subject Range Query Range Percent Splice Strand
CG33992-RA 164..942 17..798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:29 Download gff for BO25814.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RB 1407..2185 17..798 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:38 Download gff for BO25814.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RB 1407..2185 17..798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:38 Download gff for BO25814.complete
Subject Subject Range Query Range Percent Splice Strand
2L 327573..328355 17..798 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:29 Download gff for BO25814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 327573..328355 17..798 99   Minus

BO25814.pep Sequence

Translation from 16 to 814

> BO25814.pep
MEGKKKPAKQNEVKENDKEKGMEKGKEKGKEKGKEKKTKEPNFRSSEDRP
PVPQSKDTTHGTEESHHGDGDFGGPDGDREKGKNQPDGKSGIVDQNQGKD
KDKGKGKEKGMNKKGKGKKKPKDKDEDKNTKDNRSEKDCPCEICCPPKEE
DTPLIKEMRRRDRERQVRDYLRQMRHRQYMECKDLKYPSPHHKCDPIQCN
NQFCSNPRMQTHFARVQAVRSLQQILQRRNRQGDVKISKDLDSLLARLCN
SLTISDGHCRASFLDH

BO25814.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-PB 682 CG43755-PB 425..682 3..260 1411 99.6 Plus
CG31921-PA 713 CG31921-PA 430..709 1..252 291 29.7 Plus
CG31797-PA 868 CG31797-PA 587..862 9..252 262 29.1 Plus