BO25855.complete Sequence
1885 bp assembled on 2010-07-15
GenBank Submission: KX795084
> BO25855.complete
GAAGTTATCAGTCGACATGTTTCTGCCCGTGAAATCCAATCATTCCGGCG
AGGCGAGTGGCAACAACGAAGATGTCACCACCACCAGCAACAATTCCACA
CAGACGCCCAGCGATCTGAGCCCACCGGGACCCAATGAAGAGGTACTGCC
CCAGGCGCATCACCAGAATCCGGGCCACTGCATCGCCTCCTTTGCAGCCA
TCAACCAGATGAGGAACAATGCGCAGCTATGCGATGTGCGCCTGGAAGTG
GGCGGCGACACCATCAATGCCCATCGAGTGGTTCTGGCCTCCGTATCGCC
CTATTTCTATGCGATGTTCAACGACGACATGCTGGAGCGCACTCAGGGAT
TAGTTCGGCTGCATGACGTGGACAGCTCGGCGCTGCGGCAGCTGATCGAT
TACACCTACACCGGCGAGATCACGATCACCGAGCAGAACGTACAGGTGCT
GCTGCCCGCGTCCGGACTACTGCAGATGCACTCGGTGCGGGATGCCTGCT
GTAAGTTCCTGCTGCGCCAGCTGCATCCCTCCAACTGCTTGGGCATACGC
AGCTTCGCAGATGCCCACTCCTGCAAGGAGCTGCACACGCGGTCGCATAA
GTACGCCCTGCAGAACTTCCAGCAGGTTGTGGGTACCGAGGAGTTCCTGC
TGCTGCCGTTCGAGGAGGTTCGCGAGCTGATCTCCAACAGCCAGCTGAAC
ATCAGCTCCGAGGAGCGAGTCTTTGCCGCCGTCATCAATTGGGTGAAACA
TGATCTGCCCACACGAAGACTCCACATTGCCGAGTTGATGTCAAACGTCA
GACTGCCGCTGGTGAGCAGGGATTTCCTCATGAGCTGCGTGGAAACGGAG
ACCCTCATGCGCGATGACTCCGAGTGCAAGGAGCTGCTGCTGGAAGCCAT
GAAGTACCATTTGCTTCCGGAGCAGCGCAGCATAATGGGCAGCCAGCGAA
CCCAGGAGCGTCGTCCGGAGGGCATGAAACCCTACGTATTTGCGGTGGGA
GGAGGCAGTCTCTTCGCCATTCACAACGAGTGCGAGGTGTACAATCCGCG
CTCTAACTCTTGGAGTCCAGTGGCACCAATGTTGTGGCGACGATCTCGAT
CCGGAGTAACATCCCTGCACAAGCAGTTGTATGTGGTCGGCGGCTACGAT
GGAGTCAGTGATCTGGCCACGGCGGAGAGCTACAATCCTCTGACCAACAA
GTGGAGCAACATCACCCCAATGGGAACGAAACGTAGCTGTCTGGGCATCT
GCTCCTACGATGCCTTGATCTACGTTTGTGGCGGTTACGATGGCGCCTCC
TGCCTGAGCAGCATGGAGCGCTATGATCCGCTCACAGGCATCTGGAGCTC
CTGTCCGGCGATGAGCACAAGGAGAAGGTACTGCCGACTGGCTGTGCTGG
AAAATTGCATCTACAGTCTGGGCGGCTTCGATTCCACCAACTACCAGTCG
AGCGTGGAGCGGTTTGATCCCAGAGTGGGTCGCTGGCAACCGGTGCCAAG
CATGTCGGCACGCAGGAGCAGCTGCGGCGTCGCCTCCACCGACGGGCATC
TGTATTGCATTGGTGGTAATGATGGCACCATGTGCATGTCCAGCGGAGAG
CGATTCAGTTTGCGCAGGAACAGCTGGGAACCCATCGCAGCAATGCACTC
GCGAAGATCCACCCATGAAGTGGTTGAGGTGGAGGGTGCCCTCTTCGCCT
TGGGCGGCAACGATGGCAGCTCTTCGCTCAACTCCGTGGAGCGATACGAT
ACGCGGCTAAACAAGTGGAGCGTGGTCAACGCCATGGTGGCTCGACGCAG
CTCCGTCGGCGCCGCCGTCTTGGAGTGCTTCCATCTGGAGCGTGGACTGG
TGCAGACGACGAACTTAGCAAGCTTTCTAGACCAT
BO25855.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:12:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15097-RE | 2232 | CG15097-PE | 1..1851 | 17..1867 | 9105 | 99.5 | Plus |
| CG15097-RD | 2205 | CG15097-PD | 1..1851 | 17..1867 | 9105 | 99.5 | Plus |
| CG15097-RC | 1854 | CG15097-PC | 1..1851 | 17..1867 | 9105 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:12:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15097-RE | 3029 | CG15097-RE | 397..2254 | 10..1867 | 9110 | 99.4 | Plus |
| CG15097-RD | 3029 | CG15097-RD | 397..2254 | 10..1867 | 9110 | 99.4 | Plus |
| CG15097-RC | 3029 | CG15097-RC | 397..2254 | 10..1867 | 9110 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18823237..18824570 | 1656..323 | 6520 | 99.3 | Minus |
| 2R | 25286936 | 2R | 18822963..18823175 | 1867..1655 | 1065 | 100 | Minus |
| 2R | 25286936 | 2R | 18825497..18825680 | 226..43 | 920 | 100 | Minus |
| 2R | 25286936 | 2R | 18824704..18824803 | 323..224 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:12:47 has no hits.
BO25855.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 11:01:54 Download gff for
BO25855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RB | 18..1862 | 23..1869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:09 Download gff for
BO25855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RC | 410..2254 | 23..1869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:05 Download gff for
BO25855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RC | 410..2254 | 23..1869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:05 Download gff for
BO25855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18825497..18825680 | 43..226 | 100 | <- | Minus |
| 2R | 18826019..18826038 | 23..42 | 100 | | Minus |
| 2R | 18822959..18823173 | 1657..1869 | 99 | <- | Minus |
| 2R | 18823237..18824569 | 324..1656 | 99 | <- | Minus |
| 2R | 18824704..18824800 | 227..323 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:09 Download gff for
BO25855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14710464..14710678 | 1657..1869 | 99 | <- | Minus |
| arm_2R | 14710742..14712074 | 324..1656 | 99 | <- | Minus |
| arm_2R | 14712209..14712305 | 227..323 | 100 | <- | Minus |
| arm_2R | 14713002..14713185 | 43..226 | 100 | <- | Minus |
| arm_2R | 14713524..14713543 | 23..42 | 100 | | Minus |
BO25855.pep Sequence
Translation from 16 to 1885
> BO25855.pep
MFLPVKSNHSGEASGNNEDVTTTSNNSTQTPSDLSPPGPNEEVLPQAHHQ
NPGHCIASFAAINQMRNNAQLCDVRLEVGGDTINAHRVVLASVSPYFYAM
FNDDMLERTQGLVRLHDVDSSALRQLIDYTYTGEITITEQNVQVLLPASG
LLQMHSVRDACCKFLLRQLHPSNCLGIRSFADAHSCKELHTRSHKYALQN
FQQVVGTEEFLLLPFEEVRELISNSQLNISSEERVFAAVINWVKHDLPTR
RLHIAELMSNVRLPLVSRDFLMSCVETETLMRDDSECKELLLEAMKYHLL
PEQRSIMGSQRTQERRPEGMKPYVFAVGGGSLFAIHNECEVYNPRSNSWS
PVAPMLWRRSRSGVTSLHKQLYVVGGYDGVSDLATAESYNPLTNKWSNIT
PMGTKRSCLGICSYDALIYVCGGYDGASCLSSMERYDPLTGIWSSCPAMS
TRRRYCRLAVLENCIYSLGGFDSTNYQSSVERFDPRVGRWQPVPSMSARR
SSCGVASTDGHLYCIGGNDGTMCMSSGERFSLRRNSWEPIAAMHSRRSTH
EVVEVEGALFALGGNDGSSSLNSVERYDTRLNKWSVVNAMVARRSSVGAA
VLECFHLERGLVQTTNLASFLDH
BO25855.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15097-PE | 743 | CG15097-PE | 1..617 | 1..617 | 3253 | 100 | Plus |
| CG15097-PD | 734 | CG15097-PD | 1..617 | 1..617 | 3253 | 100 | Plus |
| CG15097-PC | 617 | CG15097-PC | 1..617 | 1..617 | 3253 | 100 | Plus |
| CG15097-PA | 513 | CG15097-PA | 1..513 | 105..617 | 2698 | 100 | Plus |
| dbo-PB | 620 | CG6224-PB | 18..603 | 20..602 | 1211 | 42.4 | Plus |
| CG15097-PE | 743 | CG15097-PE | 324..481 | 465..622 | 231 | 33.5 | Plus |
| CG15097-PD | 734 | CG15097-PD | 324..481 | 465..622 | 231 | 33.5 | Plus |
| CG15097-PC | 617 | CG15097-PC | 324..481 | 465..622 | 231 | 33.5 | Plus |
| CG15097-PA | 513 | CG15097-PA | 220..377 | 465..622 | 231 | 33.5 | Plus |
