BO25875.complete Sequence
2053 bp assembled on 2010-07-16
GenBank Submission: KX795310
> BO25875.complete
GAAGTTATCAGTCGACATGGGCGAAAGGAGCTTTCGAAAACTGGTATTGG
GAGTGATCCTGACGACCATCATTCTCTATGCTCTGCTTTTTTTGGACACG
CAGTGCTACGAGACTGGCGGAAAAATACATAATGCATTCTTTGTGAACAC
CGACGGATGTCGCATTATAGCCATGGATGTGATGAACCCGACCATTGCCA
AGTACACCGACTGGGAGTGGAAGGACAAGAGGTTCTACCTGAAGTGCCCC
CATCAGACCTGGTTCCGAACGGAGGTGGCGAACGGGGATTGGTACCTTAA
GCTGACCCGCGACATCGACAGAATCTTGCAGGAAAGCGATCTGACCCACG
ACTGGCAGATAAAGTGCTATTGGTTCCGGATTAAAATAAAGGGGCGTTGG
CGGGCCAAGATCTACGGTCCAACCATGTTCCCTCTGGAGTACCCGTATGC
CCTGAAAGTCCCCAAAGGACTGAGGCACATGCGAGTCAAGTGCCTGAATA
CTTTCACAAACAAAACCTTGCACGATGATGCCCATTTCTTCATTCAACCA
CCACCTGAGAAGTTGTTGAAGAAACCTCCGGCGACCTTGAAGTACTGGGA
TGGGGAGAAACACTCGAGTGGTGCGACTTCACCCATTTCTGTGATGATTT
TGGGTCTGGACTCCGTTTCGCATCTCAATTTGCTGCGCCAGATGCCGCGG
ACCGTGCGCTATATGCGCCAGAACATGTCGCAGGTGGAGTTCTGGGGCTT
CAACAAGATCGGCACCAATACCTATCCAAACTTGATAGCTTTGCTGACGG
GCCTCAGTGCGGCAGAGTCGGAGGCTTATTGGGTGCGGCAGAAATGTATG
GATAACCTGCCTCTGATTTGGAAGGAGTTCAAGAGGGCCGGTTATAATAC
CAGTTTCGCCGAGGACATGGCCATATATTCCATGTTCTATTTCGGCAAGC
CCGGCTTCAAGCGTCCGACCACGGATAACAATTTGCACGACTTCATGGTG
GATCTCTATATCAATAGGCAGGCCAGTTCCGTATCAGATACACATTGCAT
GGGCGAAAGGGCCTTCATGGATATCCTCTTGGAGATGAACGATAGGCTGC
TGCCCCACACGCAACGCTATCCCTTTTTCTCCTTCTATTGGTGGGCCAAT
GGCTTCCACGAGTTCTTCAACTCCCCCCGCCTGGCGGATGGAAGATTCGA
GCGATTGCTGAGGAGCCTCGACGACGCCGGCATAACCAACAACACCATAA
TATTCTTCATGTCGGACCACGGCTTGAGATGGGGTCTTTTTCGCAGTAGT
TTCCAGGGTATGATAGAGGACAGCCAGCCGTTTCTGTCCGTTTTGTATCC
GAAGTGGATGAGATTAAAGTACCCCATGGCCATTAAAAGCCTAGTTGGCA
ATGCCCACAGCCTGGTAACCACCTACGACCTTCATGAGACCTTGAAGCAT
ATCTTGGAACCGAGTTCCTTGGAGGATACGTCCATCACGCAGAAGACTGA
AGAATTGTGGAAGCTGAAGGGTTCCCAAACCCCCAGGGCCGTTAGCCTCT
TCTTACCCATTCCGCCCTGGAGGAACTGCAACACTTCCCACATCCCGAGT
AAGTTCTGTCTGTGCCACAAGCAGATTCCCATTCCCGAGAGCAACCGAGT
GGTGACGAAATCGGCCAGCATTATCATCGATTACGTAAATCAGTTGATGG
TGGAATACCCCGTTTGCATACCCCTTCAGTTGGACTCGATCGAAAGTGCC
TATTTCGCGGCTCCCCAGAGGGACGATGACTTCTACATCGAGAAGGGGCA
CAAGAACGTGTACCCCGAAAAAGGACCCTTCTGGAAGAAGCAAAAGTACG
AGGACAGGGATATCGTGGTGCGATTGAAAACTAAGCCGGGCAACGCCTAC
TTCGAGGGAATGACCCGCAGGCAGGGCAGCAAACTCTCTCTCGTCGGGGA
AGTGGTCCGCGTGGGGGGTGAAGGCAACAGGAACAACGACTGCATCGATA
ATCCTCTGCTGGAACCGTTCTGTCATTGTGCACTAGCAAGCTTTCTAGAC
CAT
BO25875.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:41:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31933-RA | 2022 | CG31933-PA | 1..2019 | 17..2035 | 10050 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:41:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31933-RA | 2076 | CG31933-RA | 41..2059 | 17..2035 | 10050 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:41:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1821273..1823291 | 2035..17 | 10050 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:41:15 has no hits.
BO25875.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-16 10:39:19 Download gff for
BO25875.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31933-RA | 41..2059 | 17..2037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:25 Download gff for
BO25875.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31933-RA | 41..2059 | 17..2037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:55:03 Download gff for
BO25875.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31933-RA | 41..2059 | 17..2037 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:55:03 Download gff for
BO25875.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1821271..1823291 | 17..2037 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:25 Download gff for
BO25875.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1821271..1823291 | 17..2037 | 99 | | Minus |
BO25875.pep Sequence
Translation from 16 to 2053
> BO25875.pep
MGERSFRKLVLGVILTTIILYALLFLDTQCYETGGKIHNAFFVNTDGCRI
IAMDVMNPTIAKYTDWEWKDKRFYLKCPHQTWFRTEVANGDWYLKLTRDI
DRILQESDLTHDWQIKCYWFRIKIKGRWRAKIYGPTMFPLEYPYALKVPK
GLRHMRVKCLNTFTNKTLHDDAHFFIQPPPEKLLKKPPATLKYWDGEKHS
SGATSPISVMILGLDSVSHLNLLRQMPRTVRYMRQNMSQVEFWGFNKIGT
NTYPNLIALLTGLSAAESEAYWVRQKCMDNLPLIWKEFKRAGYNTSFAED
MAIYSMFYFGKPGFKRPTTDNNLHDFMVDLYINRQASSVSDTHCMGERAF
MDILLEMNDRLLPHTQRYPFFSFYWWANGFHEFFNSPRLADGRFERLLRS
LDDAGITNNTIIFFMSDHGLRWGLFRSSFQGMIEDSQPFLSVLYPKWMRL
KYPMAIKSLVGNAHSLVTTYDLHETLKHILEPSSLEDTSITQKTEELWKL
KGSQTPRAVSLFLPIPPWRNCNTSHIPSKFCLCHKQIPIPESNRVVTKSA
SIIIDYVNQLMVEYPVCIPLQLDSIESAYFAAPQRDDDFYIEKGHKNVYP
EKGPFWKKQKYEDRDIVVRLKTKPGNAYFEGMTRRQGSKLSLVGEVVRVG
GEGNRNNDCIDNPLLEPFCHCALASFLDH
BO25875.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:39:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31933-PA | 673 | CG31933-PA | 1..673 | 1..673 | 3662 | 100 | Plus |
| CG16854-PC | 677 | CG16854-PC | 66..675 | 34..671 | 890 | 32.8 | Plus |
| CG16854-PB | 705 | CG16854-PB | 94..703 | 34..671 | 890 | 32.8 | Plus |
| CG16854-PD | 705 | CG16854-PD | 94..703 | 34..671 | 890 | 32.8 | Plus |
| CG3123-PA | 634 | CG3123-PA | 51..633 | 42..671 | 798 | 31.2 | Plus |
